Evidence map›Paper›PMID 26071365›Full record

ArticleHuman molecular genetics2015

Lhx6 and Lhx8 promote palate development through negative regulation of a cell cycle inhibitor gene, p57Kip2.

Jeffry M Cesario, Andre Landin Malt, Lindsay J Deacon, Magnus Sandberg, Daniel Vogt, Zuojian Tang, Yangu Zhao, Stuart Brown, John L Rubenstein, Juhee Jeong

Open access · bronzeAbstract read
In one paragraph

Article in Human molecular genetics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 30 citations in OpenAlex.

  1. Review
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  7. Frontiers in cell and developmental biology · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Jeffry M CesarioDepartment of Basic Science and Craniofacial Biology, New York University College of Dentistry, New York, NY 10010, USA.
Andre Landin MaltDepartment of Basic Science and Craniofacial Biology, New York University College of Dentistry, New York, NY 10010, USA.
Lindsay J DeaconDepartment of Basic Science and Craniofacial Biology, New York University College of Dentistry, New York, NY 10010, USA.
Magnus SandbergDepartment of Psychiatry, Nina Ireland Laboratory of Developmental Neurobiology, University of California, San Francisco, CA 94158, USA.
Daniel VogtDepartment of Psychiatry, Nina Ireland Laboratory of Developmental Neurobiology, University of California, San Francisco, CA 94158, USA.
Zuojian TangCenter for Health Informatics and Bioinformatics, New York University School of Medicine, New York, NY 10016, USA and.
Yangu ZhaoProgram on Genomics of Differentiation, Eunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, MD 20892, USA.
Stuart BrownCenter for Health Informatics and Bioinformatics, New York University School of Medicine, New York, NY 10016, USA and.
John L RubensteinDepartment of Psychiatry, Nina Ireland Laboratory of Developmental Neurobiology, University of California, San Francisco, CA 94158, USA.
Juhee JeongDepartment of Basic Science and Craniofacial Biology, New York University College of Dentistry, New York, NY 10010, USA, jj78@nyu.edu.
New York University · USUniversity of California, San Francisco · USEunice Kennedy Shriver National Institute of Child Health and Human Development · US

Funding

Function and regulation of Lhx genes in craniofacial developmentR00DE019486 · NIDCR · NEW YORK UNIVERSITY · PI JEONG, JUHEE · 2011 to 2013
$728k
NIDCR NIH HHS R00 DE019486
6 · The paper itself

Abstract

Cleft palate is a common birth defect in humans. Therefore, understanding the molecular genetics of palate development is important from both scientific and medical perspectives. Lhx6 and Lhx8 encode LIM homeodomain transcription factors, and inactivation of both genes in mice resulted in profound craniofacial defects including cleft secondary palate. The initial outgrowth of the palate was severely impaired in the mutant embryos, due to decreased cell proliferation. Through genome-wide transcriptional profiling, we discovered that p57(Kip2) (Cdkn1c), encoding a cell cycle inhibitor, was up-regulated in the prospective palate of Lhx6(-/-);Lhx8(-/-) mutants. p57(Kip2) has been linked to Beckwith-Wiedemann syndrome and IMAGe syndrome in humans, which are developmental disorders with increased incidents of palate defects among the patients. To determine the molecular mechanism underlying the regulation of p57(Kip2) by the Lhx genes, we combined chromatin immunoprecipitation, in silico search for transcription factor-binding motifs, and in vitro reporter assays with putative cis-regulatory elements. The results of these experiments indicated that LHX6 and LHX8 regulated p57(Kip2) via both direct and indirect mechanisms, with the latter mediated by Forkhead box (FOX) family transcription factors. Together, our findings uncovered a novel connection between the initiation of palate development and a cell cycle inhibitor via LHX. We propose a model in which Lhx6 and Lhx8 negatively regulate p57(Kip2) expression in the prospective palate area to allow adequate levels of cell proliferation and thereby promote normal palate development. This is the first report elucidating a molecular genetic pathway downstream of Lhx in palate development.

Indexed as

Gene Expression Regulation, DevelopmentalAnimalsCell ProliferationCyclin-Dependent Kinase Inhibitor p57Forkhead Transcription FactorsGene ExpressionGene Expression ProfilingGenome-Wide Association StudyGenotypeHumansLIM-Homeodomain ProteinsMaxillaMiceMutationNerve Tissue ProteinsOrganogenesisCyclin-Dependent Kinase Inhibitor p57Forkhead Transcription FactorsLHX6 protein, mouseLIM homeobox protein 8LIM-Homeodomain ProteinsNerve Tissue ProteinsRepressor ProteinsTranscription Factors

Identifiers

PMID26071365
PMCPMC4527495
OpenAlexW1751067545

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.