Evidence map›Paper›PMID 26070784›Full record

ArticleBreast cancer research : BCR2015

Genetic risk variants associated with in situ breast cancer.

Daniele Campa, Myrto Barrdahl, Mia M Gaudet, Amanda Black, Stephen J Chanock, W Ryan Diver, Susan M Gapstur, Christopher Haiman, Susan Hankinson, Aditi Hazra and 21 more

Open access · goldAbstract read
In one paragraph

Article in Breast cancer research : BCR, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed, 1 pooled it
4.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 1 synthesis or guideline pooled it, 30 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. The role of ADAMTS6 and ADAMTS17 polymorphisms in susceptibility to lumbar disc herniation in Chinese Han population.European spine journal : official publication of the European Spine Society, the European Spinal Deformity Society, and the European Section of the Cervical Spine Research Society · 2023
    Article
  6. Article
  7. Determination ofDisease markers · 2019
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  10. Association ofOncology letters · 2017
    Article
  11. Article
  12. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

31 authors at 17 institutions in 9 countries.

Daniele CampaDivision of Cancer Epidemiology, German Cancer Research Center (DKFZ), Im Neuenheimer Feld 581, 69120, Heidelberg, Germany. daniele.campa@unipi.it.
Myrto BarrdahlDivision of Cancer Epidemiology, German Cancer Research Center (DKFZ), Im Neuenheimer Feld 581, 69120, Heidelberg, Germany. m.barrdahl@dkfz.de.
Mia M GaudetEpidemiology Research Program, American Cancer Society, 250 Williams Street NW, Atlanta, GA, 30303, USA. Mia.gaudet@cancer.org.
Amanda BlackDivision of Cancer Epidemiology and Genetics, National Cancer Institute, 9000 Rockville Pike, Bethesda, MD, 20892, USA. blacka@mail.nih.gov.
Stephen J ChanockDivision of Cancer Epidemiology and Genetics, National Cancer Institute, 9000 Rockville Pike, Bethesda, MD, 20892, USA. chanocks@mail.nih.gov.
W Ryan DiverEpidemiology Research Program, American Cancer Society, 250 Williams Street NW, Atlanta, GA, 30303, USA. Ryan.diver@cancer.org.
Susan M GapsturEpidemiology Research Program, American Cancer Society, 250 Williams Street NW, Atlanta, GA, 30303, USA. Susan.gapstur@cancer.org.
Christopher HaimanDepartment of Preventive Medicine, Keck School of Medicine, University of Southern California, 1975 Zonal Avenue, Los Angeles, CA, 90033, USA. Christopher.haiman@med.usc.edu.
Susan HankinsonDepartment of Epidemiology, University of Massachusetts-Amherst School of Public Health and Health Sciences, 715 North Pleasant Street, Amherst, MA, 01003, USA. shankinson@schoolph.umass.edu.
Aditi HazraDepartment of Epidemiology, Harvard School of Public Health, 677 Huntington Avenue, Boston, MA, 02115, USA. ahazra@hsph.harvard.edu.
Brian HendersonDepartment of Preventive Medicine, Keck School of Medicine, University of Southern California, 1975 Zonal Avenue, Los Angeles, CA, 90033, USA. bhender@usc.edu.
Robert N HooverDivision of Cancer Epidemiology and Genetics, National Cancer Institute, 9000 Rockville Pike, Bethesda, MD, 20892, USA. hooverr@exchange.nih.gov.
David J HunterDepartment of Epidemiology, Harvard School of Public Health, 677 Huntington Avenue, Boston, MA, 02115, USA. dhunter@hsph.harvard.edu.
Amit D JoshiDepartment of Epidemiology, Harvard School of Public Health, 677 Huntington Avenue, Boston, MA, 02115, USA. ajoshi@hsph.harvard.edu.
Peter KraftDepartment of Epidemiology, Harvard School of Public Health, 677 Huntington Avenue, Boston, MA, 02115, USA. pkraft@hsph.harvard.edu.
Loic Le MarchandCancer Research Center of Hawaii, University of Hawaii, 701 Ilalo Street, Honolulu, HI, 96813, USA. loic@crch.hawaii.edu.
Sara LindströmDepartment of Epidemiology, Harvard School of Public Health, 677 Huntington Avenue, Boston, MA, 02115, USA. slindstr@hsph.harvard.edu.
Walter WillettDepartment of Nutrition, Harvard School of Public Health, 655 Huntington Avenue, Boston, MA, 02115, USA. wwillett@hsph.harvard.edu.
Ruth C TravisCancer Epidemiology Unit, Nuffield Department of Population Health, University of Oxford, Roosevelt Drive, Oxford, OX3 7LF, UK. ruth.travis@ceu.ox.ac.uk.
Pilar AmianoPublic Health Division of Gipuzkoa, BIODonostia Research Institute, Basque Health Department, Avenida Navarra 4, 20013, San Sebastian, Spain. epicss-san@ej-gv.es.
Afshan SiddiqSchool of Public Health, Imperial College, Norfolk Place, London, W2 1PG, UK. a.siddiq@imperial.ac.uk.
Dimitrios TrichopoulosDepartment of Epidemiology, Harvard School of Public Health, 677 Huntington Avenue, Boston, MA, 02115, USA. dtrichop@hsph.harvard.edu.
Malin SundDepartment of Surgical and Perioperative Sciences, Umeå University, 901 87, Umeå, Sweden. malin.sund@umu.se.
Anne TjønnelandDanish Cancer Society Research Center, Strandboulevarden 49, 2100, Copenhagen, Denmark. annet@cancer.dk.
Elisabete WeiderpassDepartment of Community Medicine, Faculty of Health Sciences, University of Tromsø, The Arctic University of Norway, Hansine Hansens veg 18, 9037, Tromsø, Norway. Elisabete.Weiderpass.Vainio@ki.se.
Petra H PeetersDepartment of Epidemiology, Julius Center for Health Sciences and Primary Care, University Medical Center, Universiteitsweg 100, 3584 CG, Utrecht, The Netherlands. P.H.M.Peeters@umcutrecht.nl.
Salvatore PanicoDipartimento di Medicina Clinica e Chirurgia Federico II University, via Sergio Pansini 5, Naples, 80131, Italy. spanico@unina.it.
Laure DossusInserm, Centre for research in Epidemiology and Population Health (CESP), U1018, Nutrition, Hormones and Women's Health Team, 16 avenue Paul Vaillant Couturier, 94805, Villejuif, France. Laure.DOSSUS@lyon.unicancer.fr.
Regina G ZieglerDivision of Cancer Epidemiology and Genetics, National Cancer Institute, 9000 Rockville Pike, Bethesda, MD, 20892, USA. zieglerr@mail.nih.gov.
Federico CanzianGenomic Epidemiology Group, German Cancer Research Center (DKFZ), Im Neuenheimer Feld 280, 69120, Heidelberg, Germany. f.canzian@dkfz.de.
Rudolf KaaksDivision of Cancer Epidemiology, German Cancer Research Center (DKFZ), Im Neuenheimer Feld 581, 69120, Heidelberg, Germany. r.kaaks@dkfz.de.
Harvard University · USAmerican Cancer Society · USDivision of Cancer Epidemiology and GeneticsHeidelberg University · DEUniversity of Southern California · USCentre de recherche en Epidémiologie et Santé des Populations · FRDanish Cancer Society · DKFederico II University Hospital · ITGerman Cancer Research Center · DEImperial College London · GBNational Cancer Institute · USUiT The Arctic University of Norway · NOUmeå University · SEUniversity Medical Center Utrecht · NLUniversity of Hawaii System · USUniversity of Massachusetts Amherst · USUniversity of Oxford · GB

Funding

Cancer Research UK 16491
6 · The paper itself

Abstract

introductionBreast cancer in situ (BCIS) diagnoses, a precursor lesion for invasive breast cancer, comprise about 20 % of all breast cancers (BC) in countries with screening programs. Family history of BC is considered one of the strongest risk factors for BCIS.

methodsTo evaluate the association of BC susceptibility loci with BCIS risk, we genotyped 39 single nucleotide polymorphisms (SNPs), associated with risk of invasive BC, in 1317 BCIS cases, 10,645 invasive BC cases, and 14,006 healthy controls in the National Cancer Institute's Breast and Prostate Cancer Cohort Consortium (BPC3). Using unconditional logistic regression models adjusted for age and study, we estimated the association of SNPs with BCIS using two different comparison groups: healthy controls and invasive BC subjects to investigate whether BCIS and BC share a common genetic profile.

resultsWe found that five SNPs (CDKN2BAS-rs1011970, FGFR2-rs3750817, FGFR2-rs2981582, TNRC9-rs3803662, 5p12-rs10941679) were significantly associated with BCIS risk (P value adjusted for multiple comparisons <0.0016). Comparing invasive BC and BCIS, the largest difference was for CDKN2BAS-rs1011970, which showed a positive association with BCIS (OR = 1.24, 95 % CI: 1.11-1.38, P = 1.27 x 10(-4)) and no association with invasive BC (OR = 1.03, 95 % CI: 0.99-1.07, P = 0.06), with a P value for case-case comparison of 0.006. Subgroup analyses investigating associations with ductal carcinoma in situ (DCIS) found similar associations, albeit less significant (OR = 1.25, 95 % CI: 1.09-1.42, P = 1.07 x 10(-3)). Additional risk analyses showed significant associations with invasive disease at the 0.05 level for 28 of the alleles and the OR estimates were consistent with those reported by other studies.

conclusionsOur study adds to the knowledge that several of the known BC susceptibility loci are risk factors for both BCIS and invasive BC, with the possible exception of rs1011970, a putatively functional SNP situated in the CDKN2BAS gene that may be a specific BCIS susceptibility locus.

Indexed as

Genetic Predisposition to DiseaseGenetic VariationBreast NeoplasmsCarcinoma in SituCase-Control StudiesFemaleHumansPolymorphism, Single NucleotidePopulation SurveillanceRisk

Identifiers

PMID26070784
PMCPMC4487950
OpenAlexW1869567870

What OpenQuestion holds

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LicenceCC BY
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.