Evidence map›Paper›PMID 26070676›Full record

ArticleApplied and environmental microbiology2015

Within-Farm Changes in Dairy Farm-Associated Salmonella Subtypes and Comparison to Human Clinical Isolates in Michigan, 2000-2001 and 2009.

Greg G Habing, Shannon Manning, Carole Bolin, Yuehua Cui, James Rudrik, Stephen Dietrich, John B Kaneene

Abstract readComparative Study
In one paragraph

Article in Applied and environmental microbiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Greg G HabingCenter for Comparative Epidemiology, College of Veterinary Medicine, Michigan State University, East Lansing, Michigan, USA.
Shannon ManningDepartment of Microbiology and Molecular Genetics, Michigan State University, East Lansing, Michigan, USA.
Carole BolinDiagnostic Center for Population and Animal Health, Michigan State University, East Lansing, Michigan, USA.
Yuehua CuiDepartment of Statistics and Probability, Michigan State University, East Lansing, Michigan, USA.
James RudrikInfectious Disease Division, Michigan Department of Community Health, Lansing, Michigan, USA.
Stephen DietrichInfectious Disease Division, Michigan Department of Community Health, Lansing, Michigan, USA.
John B KaneeneCenter for Comparative Epidemiology, College of Veterinary Medicine, Michigan State University, East Lansing, Michigan, USA kaneenej@cvm.msu.edu.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Temporal changes in the distribution of Salmonella subtypes in livestock populations may have important impacts on human health. The first objective of this research was to determine the within-farm changes in the population of subtypes of Salmonella on Michigan dairy farms that were sampled longitudinally in 2000-2001 and again in 2009. The second objective was to determine the yearly frequency (2001 through 2012) of reported human illnesses in Michigan associated with the same subtypes. Comparable sampling techniques were used to collect fecal and environmental samples from the same 18 Michigan dairy farms in 2000-2001 and 2009. Serotypes, multilocus sequence types (STs), and pulsed-field gel electrophoresis (PFGE) banding patterns were identified for isolates from 6 farms where >1 Salmonella isolate was recovered in both 2000-2001 and 2009. The distribution of STs was significantly different between time frames (P < 0.05); only two of 31 PFGE patterns were identified in both time frames, and each was recovered from the same farm in each time frame. Previously reported within-farm decreases in the frequency of multidrug-resistant (MDR) Salmonella were due to recovery of MDR subtypes of S. enterica serotypes Senftenberg and Typhimurium in 2000-2001 and genetically distinct, pansusceptible subtypes of the same serotypes in 2009. The annual frequency of human illnesses between 2001 and 2012 with a PFGE pattern matching a bovine strain decreased for patterns recovered from dairy farms in 2000-2001 and increased for patterns recovered in 2009. These data suggest important changes in the population of Salmonella on dairy farms and in the frequency of human illnesses associated with cattle-derived subtypes.

Indexed as

AnimalsAnti-Bacterial AgentsCattleCattle DiseasesHumansMichiganMicrobial Sensitivity TestsMolecular Sequence DataPhylogenySalmonellaSalmonella InfectionsSalmonella Infections, AnimalSerotypingAnti-Bacterial Agents

Identifiers

PMID26070676
PMCPMC4551238

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.