Evidence map›Paper›PMID 26070565›Full record

ArticleThe Journal of biological chemistry2015

Compartmentation of Metabolism of the C12-, C9-, and C5-n-dicarboxylates in Rat Liver, Investigated by Mass Isotopomer Analysis: ANAPLEROSIS FROM DODECANEDIOATE.

Zhicheng Jin, Fang Bian, Kristyen Tomcik, Joanne K Kelleher, Guo-Fang Zhang, Henri Brunengraber

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
0.9field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
  2. Article
  3. Odd-Chain Dicarboxylic Acid Feeding Produces a Glutaric Aciduria Type 1-Like Metabolic Signature in Mice.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2025
    Article
  4. Review
  5. Article
  6. Review
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. The Mystery of Extramitochondrial Proteins Lysine Succinylation.International journal of molecular sciences · 2021
    Review
  14. Article
  15. Review
  16. Article
  17. Article
  18. Flux analysis of inborn errors of metabolism.Journal of inherited metabolic disease · 2018
    Review
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Zhicheng JinFrom the Department of Nutrition, Case Western Reserve University, Cleveland, Ohio 44106 and.
Fang BianFrom the Department of Nutrition, Case Western Reserve University, Cleveland, Ohio 44106 and.
Kristyen TomcikFrom the Department of Nutrition, Case Western Reserve University, Cleveland, Ohio 44106 and.
Joanne K Kelleherthe Department of Chemical Engineering, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139.
Guo-Fang ZhangFrom the Department of Nutrition, Case Western Reserve University, Cleveland, Ohio 44106 and.
Henri BrunengraberFrom the Department of Nutrition, Case Western Reserve University, Cleveland, Ohio 44106 and hxb8@case.edu.
Case Western Reserve University · US

Funding

Dynamic Metabolomics via Isotopomer Analysis(RMI)R33DK070291 · NIDDK · CASE WESTERN RESERVE UNIVERSITY · PI BRUNENGRABER, HENRI · 2004 to 2006
$3.3M
NIDDK NIH HHS 5T32DK0077319NIDDK NIH HHS R33 DK070291NIDDK NIH HHS R33DK070291
6 · The paper itself

Abstract

We investigated the compartmentation of the catabolism of dodecanedioate (DODA), azelate, and glutarate in perfused rat livers, using a combination of metabolomics and mass isotopomer analyses. Livers were perfused with recirculating or nonrecirculating buffer containing one fully (13)C-labeled dicarboxylate. Information on the peroxisomal versus mitochondrial catabolism was gathered from the labeling patterns of acetyl-CoA proxies, i.e. total acetyl-CoA, the acetyl moiety of citrate, C-1 + 2 of β-hydroxybutyrate, malonyl-CoA, and acetylcarnitine. Additional information was obtained from the labeling patterns of citric acid cycle intermediates and related compounds. The data characterize the partial oxidation of DODA and azelate in peroxisomes, with terminal oxidation in mitochondria. We did not find evidence of peroxisomal oxidation of glutarate. Unexpectedly, DODA contributes a substantial fraction to anaplerosis of the citric acid cycle. This opens the possibility to use water-soluble DODA in nutritional or pharmacological anaplerotic therapy when other anaplerotic substrates are impractical or contraindicated, e.g. in propionic acidemia and methylmalonic acidemia.

Indexed as

Amino Acid Metabolism, Inborn ErrorsAnimalsCitric Acid CycleCoenzyme ADicarboxylic AcidsFatty AcidsGlutaratesHumansLiverMalonyl Coenzyme AMetabolism, Inborn ErrorsMitochondriaMyocardiumOxidation-ReductionPeroxisomesPropionic AcidemiaCoenzyme ADicarboxylic Acidsdodecanedioic acidFatty AcidsGlutaratesMalonyl Coenzyme Acell compartmentalizationcoenzyme A (CoA)fatty acid metabolismisotopic tracerliverliver metabolismmetabolismperoxisomeβ-oxidation

Identifiers

PMID26070565
PMCPMC4513124
OpenAlexW1563438791

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.