Evidence map›Paper›PMID 26070368›Full record

ArticleVirus genes2015

Isolation of buffalo poxvirus from clinical case and variations in the genetics of the B5R gene over fifty passages.

Mohsan Ullah Goraya, Zafar Ul Ahsan Qureshi, Muhammad Abbas, Muhammad Ashraf, Muhammad Munir

Open access · bronzeAbstract read
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In one paragraph

Article in Virus genes, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 9 citations in OpenAlex.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 5 institutions in 3 countries.

Mohsan Ullah GorayaCollege of Animal Sciences, Fujain Agriculture and Forestry University, Fuzhou, China, goraya_uaf@yahoo.com.
Zafar Ul Ahsan Qureshi
Muhammad Abbas
Muhammad Ashraf
Muhammad Munir
Fujian Agriculture and Forestry University · CNGovernment of PunjabThe Pirbright Institute · GBUniversity of Agriculture Faisalabad · PKUniversity of Veterinary and Animal Sciences · PK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Outbreaks of buffalopox affect udder and teats, which may ultimately lead to mastitis in dairy buffalo and can significantly compromise the production. In this study, we report isolation of buffalo poxvirus and sequence analysis of the B5R gene collected from the buffalo clinically suspected to be poxvirus infected. The virus was isolated on BHK-21 cell line and was passaged for 50 times, B5R gene was amplified and sequenced using gene-specific primers, and analyzed at both nucleotide and amino acid levels. Phylogenetically, the isolate can be classified close to the previously reported Pakistani and Indian isolates with certain level of differential clustering patterns. Three significant putative mutations (I2K, N64D, and K111E) were observed in the B5R protein. The K111E was common with previous human isolate from Karachi, Pakistan in 2005. These mutations differed from poxviruses reported from the neighboring countries. Some deletion mutations were observed which were recovered in upcoming passages. The K111E mutation suggests potential to cause zoonotic infection in human all over the country.

Indexed as

BuffaloesMutationAmino Acid SubstitutionAnimalsCell LineCluster AnalysisCricetinaeDNA, ViralEpithelial CellsMolecular Sequence DataPakistanPhylogenyPoint MutationPoxviridaePoxviridae InfectionsSequence Analysis, DNADNA, ViralViral Envelope Proteins

Identifiers

PMID26070368
OpenAlexW1939087423

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.