Evidence map›Paper›PMID 26070012›Full record

ArticleMolecular medicine (Cambridge, Mass.)2015

Coding Microsatellite Frameshift Mutations Accumulate in Atherosclerotic Carotid Artery Lesions: Evaluation of 26 Cases and Literature Review.

Carolin Kurz, Maani Hakimi, Matthias Kloor, Caspar Grond-Ginsbach, Marie-Luise Gross-Weissmann, Dittmar Böckler, Magnus von Knebel Doeberitz, Susanne Dihlmann

Open access · goldAbstract readCase Reports
In one paragraph

Article in Molecular medicine (Cambridge, Mass.), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.2field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Carolin KurzDepartment of Neurology, Technical University Munich, Munich, Germany.
Maani HakimiDepartment of Vascular and Endovascular Surgery, University Hospital Heidelberg, Heidelberg, Germany.
Matthias KloorApplied Tumor Biology, Institute of Pathology, University Hospital Heidelberg, Heidelberg, Germany.
Caspar Grond-GinsbachDepartment of Neurology, University Hospital Heidelberg, Heidelberg, Germany.
Marie-Luise Gross-WeissmannGeneral Pathology, Institute of Pathology, University Hospital Heidelberg, Heidelberg, Germany.
Dittmar BöcklerDepartment of Vascular and Endovascular Surgery, University Hospital Heidelberg, Heidelberg, Germany.
Magnus von Knebel DoeberitzApplied Tumor Biology, Institute of Pathology, University Hospital Heidelberg, Heidelberg, Germany.
Susanne DihlmannDepartment of Vascular and Endovascular Surgery, University Hospital Heidelberg, Heidelberg, Germany.
University Hospital Heidelberg · DEHeidelberg University · DETechnical University of Munich · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Somatic DNA alterations are known to occur in atherosclerotic carotid artery lesions; however, their significance is unknown. The accumulation of microsatellite mutations in coding DNA regions may reflect a deficiency of the DNA mismatch repair (MMR) system. Alternatively, accumulation of these coding microsatellite mutations may indicate that they contribute to the pathology. To discriminate between these two possibilities, we compared the mutation frequencies in coding microsatellites (likely functionally relevant) with those in noncoding microsatellites (likely neutral). Genomic DNA was isolated from carotid endarterectomy (CEA) specimens of 26 patients undergoing carotid surgery and from 15 nonatherosclerotic control arteries. Samples were analyzed by DNA fragment analysis for instability at three noncoding (BAT25, BAT26, CAT25) and five coding (AIM2, ACVR2, BAX, CASP5, TGFBR2) microsatellite loci, with proven validity for detection of microsatellite instability in neoplasms. We found an increased frequency of coding microsatellite mutations in CEA specimens compared with control specimens (34.6 versus 0%; p = 0.0013). Five CEA specimens exhibited more than one frameshift mutation, and ACVR2 and CASP5 were affected most frequently (5/26 and 6/26). Moreover, the rate of coding microsatellite alterations (15/130) differed significantly from that of noncoding alterations (0/78) in CEA specimens (p = 0.0013). In control arteries, no microsatellite alterations were observed, neither in coding nor in noncoding microsatellite loci. In conclusion, the specific accumulation of coding mutations suggests that these mutations play a role in the pathogenesis of atherosclerotic carotid lesions, since the absence of mutations in noncoding microsatellites argues against general microsatellite instability, reflecting MMR deficiency.

Indexed as

Microsatellite InstabilityAgedAged, 80 and overAtherosclerosisCarotid ArteriesDNA Mismatch RepairFemaleFrameshift MutationHumansMaleMicrosatellite RepeatsMiddle AgedOpen Reading Frames

Identifiers

PMID26070012
PMCPMC4607617
OpenAlexW2132699315

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.