Evidence map›Paper›PMID 26069442›Full record

ArticleBreeding science2015

Genetic diversity of the black gram [Vigna mungo (L.) Hepper] gene pool as revealed by SSR markers.

Anochar Kaewwongwal, Alisa Kongjaimun, Prakit Somta, Sompong Chankaew, Tarikar Yimram, Peerasak Srinives

Abstract read
In one paragraph

Article in Breeding science, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Genetics, genomics, and breeding of black gram [Frontiers in plant science · 2023
    Review
  7. Review
  8. Vignette ofFrontiers in genetics · 2022
    Review
  9. Review
  10. The Genome and Transcriptome Analysis of thePlants (Basel, Switzerland) · 2020
    Article
  11. Article
  12. Article
  13. Development of transcriptome based web genomic resources of yellow mosaic disease inPhysiology and molecular biology of plants : an international journal of functional plant biology · 2017
    Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Anochar KaewwongwalDepartment of Agronomy, Faculty of Agriculture at Kamphaeng Saen, Kasetsart University , Kamphaeng Saen, Nakhon Pathom 73140 , Thailand.
Alisa KongjaimunDepartment of Agronomy, Faculty of Agriculture at Kamphaeng Saen, Kasetsart University , Kamphaeng Saen, Nakhon Pathom 73140 , Thailand.
Prakit SomtaDepartment of Agronomy, Faculty of Agriculture at Kamphaeng Saen, Kasetsart University , Kamphaeng Saen, Nakhon Pathom 73140 , Thailand.
Sompong ChankaewDepartment of Agronomy, Faculty of Agriculture at Kamphaeng Saen, Kasetsart University , Kamphaeng Saen, Nakhon Pathom 73140 , Thailand.
Tarikar YimramDepartment of Agronomy, Faculty of Agriculture at Kamphaeng Saen, Kasetsart University , Kamphaeng Saen, Nakhon Pathom 73140 , Thailand.
Peerasak SrinivesDepartment of Agronomy, Faculty of Agriculture at Kamphaeng Saen, Kasetsart University , Kamphaeng Saen, Nakhon Pathom 73140 , Thailand.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In this study, 520 cultivated and 14 wild accessions of black gram (Vigna mungo (L.) Hepper) were assessed for diversity using 22 SSR markers. Totally, 199 alleles were detected with a mean of 9.05 alleles per locus. Wild black gram showed higher gene diversity than cultivated black gram. Gene diversity of cultivated accessions among regions was comparable, while allelic richness of South Asia was higher than that of other regions. 78.67% of the wild gene diversity presented in cultivated accessions, indicating that the domestication bottleneck effect in black gram is relatively low. Genetic distance analysis revealed that cultivated black gram was more closely related to wild black gram from South Asia than that from Southeast Asia. STRUCTURE, principal coordinate and neighbor-joining analyses consistently revealed that 534 black gram accessions were grouped into three major subpopulations. The analyses also revealed that cultivated black gram from South Asia was genetically distinct from that from West Asia. Comparison by SSR analysis with other closely related Vigna species, including mungbean, azuki bean, and rice bean, revealed that level of gene diversity of black gram is comparable to that of mungbean and rice bean but lower than that of azuki bean.

Indexed as

domesticationmicrosatellite markerplant genetic resourcesurd beanVigna

Identifiers

PMID26069442
PMCPMC4430507

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.