Evidence map›Paper›PMID 26067129›Full record

ArticlePloS one2015

Association and Validation of Yield-Favored Alleles in Chinese Cultivars of Common Wheat (Triticumaestivum L.).

Jie Guo, Chenyang Hao, Yong Zhang, Boqiao Zhang, Xiaoming Cheng, Lin Qin, Tian Li, Weiping Shi, Xiaoping Chang, Ruilian Jing and 4 more

Abstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
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  5. Genetic architecture underpinning yield component traits in wheat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2020
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Jie GuoNational Key Laboratory of Crop Genetics and Germplasm Enhancement, Nanjing Agricultural University, Nanjing, Jiangsu, China.
Chenyang HaoKey Laboratory of Crop Gene Resources and Germplasm Enhancement, Ministry of Agriculture/Institute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing, China.
Yong ZhangKey Laboratory of Wheat Biology and Genetic Improvement for Low and Middle Yangtze Valley (Ministry of Agriculture), Lixiahe Agricultural Institute of Jiangsu Province, Yangzhou, Jiangsu, China.
Boqiao ZhangKey Laboratory of Wheat Biology and Genetic Improvement for Low and Middle Yangtze Valley (Ministry of Agriculture), Lixiahe Agricultural Institute of Jiangsu Province, Yangzhou, Jiangsu, China.
Xiaoming ChengKey Laboratory of Wheat Biology and Genetic Improvement for Low and Middle Yangtze Valley (Ministry of Agriculture), Lixiahe Agricultural Institute of Jiangsu Province, Yangzhou, Jiangsu, China.
Lin QinNational Key Laboratory of Crop Genetics and Germplasm Enhancement, Nanjing Agricultural University, Nanjing, Jiangsu, China.
Tian LiKey Laboratory of Crop Gene Resources and Germplasm Enhancement, Ministry of Agriculture/Institute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing, China.
Weiping ShiKey Laboratory of Wheat Biology and Genetic Improvement for Low and Middle Yangtze Valley (Ministry of Agriculture), Lixiahe Agricultural Institute of Jiangsu Province, Yangzhou, Jiangsu, China.
Xiaoping ChangKey Laboratory of Crop Gene Resources and Germplasm Enhancement, Ministry of Agriculture/Institute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing, China.
Ruilian JingKey Laboratory of Crop Gene Resources and Germplasm Enhancement, Ministry of Agriculture/Institute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing, China.
Wuyun YangCrop Research Institute, Sichuan Academy of Agricultural Sciences, Chengdu, Sichuan, China.
Wenjing HuKey Laboratory of Wheat Biology and Genetic Improvement for Low and Middle Yangtze Valley (Ministry of Agriculture), Lixiahe Agricultural Institute of Jiangsu Province, Yangzhou, Jiangsu, China.
Xueyong ZhangKey Laboratory of Crop Gene Resources and Germplasm Enhancement, Ministry of Agriculture/Institute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing, China.
Shunhe ChengNational Key Laboratory of Crop Genetics and Germplasm Enhancement, Nanjing Agricultural University, Nanjing, Jiangsu, China; Key Laboratory of Wheat Biology and Genetic Improvement for Low and Middle Yangtze Valley (Ministry of Agriculture), Lixiahe Agricultural Institute of Jiangsu Province, Yangzhou, Jiangsu, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Common wheat is one of the most important crops in China, which is the largest producer in the world. A set of 230 cultivars was used to identify yield-related loci by association mapping. This set was tested for seven yield-related traits, viz. plant height (PH), spike length (SL), spikelet number per spike (SNPS), kernel number per spike (KNPS), thousand-kernel weight (TKW), kernel weight per spike (KWPS), and sterile spikelet number (SSN) per plant in four environments. A total of 106 simple sequence repeat (SSR) markers distributed on all 21 chromosomes were used to screen the set. Twenty-one and 19 of them were associated with KNPS and TKW, respectively. Association mapping detected 73 significant associations across 50 SSRs, and the phenotypic variation explained (R2) by the associations ranged from 1.54 to 23.93%. The associated loci were distributed on all chromosomes except 4A, 7A, and 7D. Significant and potentially new alleles were present on 8 chromosomes, namely 1A, 1D, 2A, 2D, 3D, 4B, 5B, and 6B. Further analysis showed that genetic effects of associated loci were greatly influenced by association panels, and the R2 of crucial loci were lower in modern cultivars than in the mini core collection, probably caused by strong selection in wheat breeding. In order to confirm the results of association analysis, yield-related favorable alleles Xgwm135-1A138, Xgwm337-1D186, Xgwm102-2D144, and Xgwm132-6B128 were evaluated in a double haploid (DH) population derived from Hanxuan10 xLumai14.These favorable alleles that were validated in various populations might be valuable in breeding for high-yield.

Indexed as

Genetic MarkersQuantitative Trait LociAllelesBreedingChromosome MappingChromosomes, PlantGenes, PlantMicrosatellite RepeatsPhenotypeSeedsTriticumGenetic Markers

Identifiers

PMID26067129
PMCPMC4466017

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.