Evidence map›Paper›PMID 26065530›Full record

ArticleJournal of visualized experiments : JoVE2015

Isolation of Primary Human Colon Tumor Cells from Surgical Tissues and Culturing Them Directly on Soft Elastic Substrates for Traction Cytometry.

M Yakut Ali, Sandeep V Anand, Krishnarao Tangella, Davendra Ramkumar, Taher A Saif

Open access · hybridAbstract readVideo-Audio Media
In one paragraph

Article in Journal of visualized experiments : JoVE, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.5field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 11 citations in OpenAlex.

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  6. Tea polyphenols induce S phase arrest and apoptosis in gallbladder cancer cells.Brazilian journal of medical and biological research = Revista brasileira de pesquisas medicas e biologica · 2018
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

M Yakut AliDepartment of Mechanical Science and Engineering, University of Illinois at Urbana-Champaign.
Sandeep V AnandDepartment of Mechanical Science and Engineering, University of Illinois at Urbana-Champaign.
Krishnarao TangellaCollege of Medicine, University of Illinois at Urbana-Champaign; Provena Covenant Medical Centre.
Davendra RamkumarCollege of Medicine, University of Illinois at Urbana-Champaign; Provena Covenant Medical Centre.
Taher A SaifDepartment of Mechanical Science and Engineering, University of Illinois at Urbana-Champaign; Micro and Nanotechnology Laboratory, University of Illinois at Urbana-Champaign; saif@illinois.edu.
University of Illinois Urbana-Champaign · US

Funding

Training the Next Generation of Researchers in Cancer Nanotechnology at the NCI MR25CA154015 · NCI · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI BASHIR, RASHID, NARDULLI, ANN · 2010 to 2014
$1.5M
NCI NIH HHS R25 CA154015NCI NIH HHS R25 CA154015A
6 · The paper itself

Abstract

Cancer cells respond to matrix mechanical stiffness in a complex manner using a coordinated, hierarchical mechano-chemical system composed of adhesion receptors and associated signal transduction membrane proteins, the cytoskeletal architecture, and molecular motors. Mechanosensitivity of different cancer cells in vitro are investigated primarily with immortalized cell lines or murine derived primary cells, not with primary human cancer cells. Hence, little is known about the mechanosensitivity of primary human colon cancer cells in vitro. Here, an optimized protocol is developed that describes the isolation of primary human colon cells from healthy and cancerous surgical human tissue samples. Isolated colon cells are then successfully cultured on soft (2 kPa stiffness) and stiff (10 kPa stiffness) polyacrylamide hydrogels and rigid polystyrene (~3.6 GPa stiffness) substrates functionalized by an extracellular matrix (fibronectin in this case). Fluorescent microbeads are embedded in soft gels near the cell culture surface, and traction assay is performed to assess cellular contractile stresses using free open access software. In addition, immunofluorescence microscopy on different stiffness substrates provides useful information about primary cell morphology, cytoskeleton organization and vinculin containing focal adhesions as a function of substrate rigidity.

Indexed as

Acrylic ResinsBiomechanical PhenomenaCell Culture TechniquesColonColonic NeoplasmsElasticityExtracellular Matrix ProteinsFlow CytometryHumansHydrogelsMicroscopy, FluorescencePolyacrylamidesAcrylic ResinsExtracellular Matrix ProteinsHydrogelsPolyacrylamides

Identifiers

PMID26065530
PMCPMC4544693
OpenAlexW654447051

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.