Evidence map›Paper›PMID 26064625›Full record

ArticleRoyal Society open science2015

Whole transcriptome analysis reveals changes in expression of immune-related genes during and after bleaching in a reef-building coral.

Jorge H Pinzón, Bishoy Kamel, Colleen A Burge, C Drew Harvell, Mónica Medina, Ernesto Weil, Laura D Mydlarz

Open access · goldAbstract read
In one paragraph

Article in Royal Society open science, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 77 papers.

0numbers the graph read from it
0cells of the map it votes in
77citing papers in PubMed
18.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

77 citing papers in PubMed, 227 citations in OpenAlex.

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17 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 2 countries.

Jorge H PinzónDepartment of Biology , University of Texas Arlington , Arlington, TX 76016, USA.
Bishoy KamelDepartment of Biology , The Pennsylvania State University , State College, PA 16802, USA.
Colleen A BurgeInstitute of Marine and Environmental Technology , University of Maryland Baltimore County Columbus Center , 701 East Pratt Street, Baltimore, MD 21202, USA.
C Drew HarvellDepartment of Ecology and Evolutionary Biology , Cornell University , Ithaca, NY 14853, USA.
Mónica MedinaDepartment of Biology , The Pennsylvania State University , State College, PA 16802, USA.
Ernesto WeilDepartment of Marine Sciences , University of Puerto Rico-Mayagüez , La Parguera, PR 00865, USA.
Laura D MydlarzDepartment of Biology , University of Texas Arlington , Arlington, TX 76016, USA.
Pennsylvania State University · USThe University of Texas at Arlington · USCornell University · USUniversity of Maryland, Baltimore County · USUniversity of Puerto Rico-Mayaguez · PR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Climate change is negatively affecting the stability of natural ecosystems, especially coral reefs. The dissociation of the symbiosis between reef-building corals and their algal symbiont, or coral bleaching, has been linked to increased sea surface temperatures. Coral bleaching has significant impacts on corals, including an increase in disease outbreaks that can permanently change the entire reef ecosystem. Yet, little is known about the impacts of coral bleaching on the coral immune system. In this study, whole transcriptome analysis of the coral holobiont and each of the associate components (i.e. coral host, algal symbiont and other associated microorganisms) was used to determine changes in gene expression in corals affected by a natural bleaching event as well as during the recovery phase. The main findings include evidence that the coral holobiont and the coral host have different responses to bleaching, and the host immune system appears suppressed even a year after a bleaching event. These results support the hypothesis that coral bleaching changes the expression of innate immune genes of corals, and these effects can last even after recovery of symbiont populations. Research on the role of immunity on coral's resistance to stressors can help make informed predictions on the future of corals and coral reefs.

Indexed as

climate changecoral bleachingimmune systemsymbiosis dissociationthermal stresstranscriptomics

Identifiers

PMID26064625
PMCPMC4448857
OpenAlexW2080427206

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.