Evidence map›Paper›PMID 26064623›Full record

ArticleRoyal Society open science2015

New insights for Drosophila GAGA factor in larvae.

Marta Blanch, David Piñeyro, Jordi Bernués

Abstract read
In one paragraph

Article in Royal Society open science, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Marta BlanchDepartament de Genòmica Molecular , Institut de Biologia Molecular de Barcelona-CSIC, Parc Científic de Barcelona , Barcelona 08028, Spain ; Cell and Developmental Biology Programme , Institute for Research in Biomedicine , Barcelona, Spain.
David PiñeyroDepartament de Genòmica Molecular , Institut de Biologia Molecular de Barcelona-CSIC, Parc Científic de Barcelona , Barcelona 08028, Spain ; Cell and Developmental Biology Programme , Institute for Research in Biomedicine , Barcelona, Spain.
Jordi BernuésDepartament de Genòmica Molecular , Institut de Biologia Molecular de Barcelona-CSIC, Parc Científic de Barcelona , Barcelona 08028, Spain ; Cell and Developmental Biology Programme , Institute for Research in Biomedicine , Barcelona, Spain.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

GAGA factor plays important roles during Drosophila embryogenesis and its maternal contribution is essential for early development. Here, the role of GAGA factor was studied in 3rd instar larvae using depletion and overexpression conditions in wing disc and transcriptome analysis. We found that genes changing expression were different to those previously described using GAGA mutants in embryos. No apparent phenotypes on GAGA depletion could usually be observed at larval stages in imaginal discs but a strong effect on salivary gland polytene chromosomes was observed. In the adult, GAGA depletion produced many defects like abnormal cell proliferation in the wing, impaired dorsal closure and resulted in homeotic transformation of abdominal segment A5. Unexpectedly, no effects on Ultrabithorax expression were observed. Short overexpression of GAGA factor in 3rd instar larvae also resulted in activation of a set of genes not previously described to be under GAGA regulation, and in lethality at pupa. Our results suggest a little contribution of GAGA factor on gene transcription in wing discs and a change of the genes regulated in comparison with embryo. GAGA factor activity thus correlates with the global changes in gene expression that take place at the embryo-to-larva and, later, at the larva-to-pupa transitions.

Indexed as

GAGA factorgene regulationtranscriptome analysis

Identifiers

PMID26064623
PMCPMC4448821

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.