Evidence map›Paper›PMID 26063941›Full record

ArticleIndian journal of microbiology2015

Functional Identification of OphR, an IclR Family Transcriptional Regulator Involved in the Regulation of the Phthalate Catabolic Operon in Rhodococcus sp. Strain DK17.

Ki Young Choi, Beom Sik Kang, Myung Hee Nam, Woo Jun Sul, Eungbin Kim

Open access · bronzeAbstract read
In one paragraph

Article in Indian journal of microbiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.5field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 8 citations in OpenAlex.

  1. Review
  2. Molecules (Basel, Switzerland) · 2023
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 1 country.

Ki Young ChoiDepartment of Systems Biology, Yonsei University, Seoul, 120-749 Korea ; Department of Systems Biotechnology, Chung-Ang University, Anseong, 456-756 Korea.
Beom Sik KangSchool of Life Science and Biotechnology, Kyungpook National University, Daegu, 702-701 Korea.
Myung Hee NamKorea Basic Science Institute, Seoul Branch, Seoul, 136-701 Korea.
Woo Jun SulDepartment of Systems Biotechnology, Chung-Ang University, Anseong, 456-756 Korea.
Eungbin KimDepartment of Systems Biology, Yonsei University, Seoul, 120-749 Korea.
Yonsei University · KRChung-Ang University · KRKorea Basic Science Institute · KRKyungpook National University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A putative gene for a transcriptional regulator (ophR) was detected near each copy of the duplicated phthalate-degrading operon of Rhodococcus sp. DK17. Sequence analysis and molecular modeling indicate that OphR belongs to the IclR family of transcriptional regulators and possesses the N-terminal DNA-binding and C-terminal effector-binding domains. DNA-binding assays demonstrate that OphR regulates the phthalate operon by binding to the ophA1-ophR intergenic region.

Indexed as

PhthalateRegulatorRhodococcus sp. strain DK17Transcription initiation

Identifiers

PMID26063941
PMCPMC4456497
OpenAlexW1966281597

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.