Evidence map›Paper›PMID 26063829›Full record

ArticleOpen biology2015

Warburg Micro syndrome is caused by RAB18 deficiency or dysregulation.

Mark T Handley, Sarah M Carpanini, Girish R Mali, Duska J Sidjanin, Irene A Aligianis, Ian J Jackson, David R FitzPatrick

Open access · goldAbstract readComparative Study
In one paragraph

Article in Open biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 58 citations in OpenAlex.

  1. Article
  2. Article
  3. Molecular therapy. Nucleic acids · 2024
    Article
  4. Article
  5. Article
  6. Article
  7. First Clinical Report of TwoJournal of pediatric genetics · 2023
    Review
  8. Article
  9. Review
  10. Article
  11. NovelJournal of clinical neurology (Seoul, Korea) · 2022
    Article
  12. Article
  13. Review
  14. Article
  15. Review
  16. Rab18: new insights into the function of an essential protein.Cellular and molecular life sciences : CMLS · 2019
    Review
  17. Article
  18. TRAPPing Rab18 in lipid droplets.The EMBO journal · 2017
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Mark T HandleyMRC Human Genetics Unit, Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh EH4 2XU, UK mark.handley@igmm.ed.ac.uk.
Sarah M CarpaniniDivision of Neurobiology, The Roslin Institute and R(D)SVS, University of Edinburgh, Easter Bush, Midlothian EH25 9RG, UK.
Girish R MaliMRC Human Genetics Unit, Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh EH4 2XU, UK.
Duska J SidjaninDepartment of Cell Biology, Neurobiology, and Anatomy, Medical College of Wisconsin, Milwaukee, WI 53226, USA.
Irene A AligianisMRC Human Genetics Unit, Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh EH4 2XU, UK.
Ian J JacksonMRC Human Genetics Unit, Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh EH4 2XU, UK.
David R FitzPatrickMRC Human Genetics Unit, Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh EH4 2XU, UK.
MRC Institute of Genetics and Molecular Medicine · GBMedical College of Wisconsin · USRoslin Institute · GB

Funding

MORPHOLOGY MODULEP30EY001931 · NEI · MEDICAL COLLEGE OF WISCONSIN · PI LINK, BRIAN A · 1985 to 2016
$9.8M
Genetic Models of Anterior Segment DevelopmentR01EY018872 · NEI · MEDICAL COLLEGE OF WISCONSIN · PI SIDJANIN, D. J. · 2009 to 2012
$1.5M
Medical Research Council MC_PC_U127561093Medical Research Council MC_PC_U127561112Medical Research Council MC_U127561093Medical Research Council MC_U127561112NEI NIH HHS EY018872NEI NIH HHS P30 EY001931NEI NIH HHS R01 EY018872
6 · The paper itself

Abstract

RAB18, RAB3GAP1, RAB3GAP2 and TBC1D20 are each mutated in Warburg Micro syndrome, a rare autosomal recessive multisystem disorder. RAB3GAP1 and RAB3GAP2 form a binary 'RAB3GAP' complex that functions as a guanine-nucleotide exchange factor (GEF) for RAB18, whereas TBC1D20 shows modest RAB18 GTPase-activating (GAP) activity in vitro. Here, we show that in the absence of functional RAB3GAP or TBC1D20, the level, localization and dynamics of cellular RAB18 is altered. In cell lines where TBC1D20 is absent from the endoplasmic reticulum (ER), RAB18 becomes more stably ER-associated and less cytosolic than in control cells. These data suggest that RAB18 is a physiological substrate of TBC1D20 and contribute to a model in which a Rab-GAP can be essential for the activity of a target Rab. Together with previous reports, this indicates that Warburg Micro syndrome can be caused directly by loss of RAB18, or indirectly through loss of RAB18 regulators RAB3GAP or TBC1D20.

Indexed as

Gene Expression RegulationAbnormalities, MultipleAnimalsBlotting, WesternCase-Control StudiesCataractCells, CulturedCorneaCytosolEndoplasmic ReticulumFibroblastsFlow CytometryFluorescent Antibody TechniqueGuanosine TriphosphateHeLa CellsHumansGuanosine TriphosphateRAB18 protein, humanrab1 GTP-Binding ProteinsRAB3GAP1 protein, humanrab3 GTP-Binding Proteinsrab GTP-Binding ProteinsRNA, MessengerTBC1D20 protein, humanGAPGEFRabRAB18Ras

Identifiers

PMID26063829
PMCPMC4632505
OpenAlexW1755639546

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.