Evidence map›Paper›PMID 26063576›Full record

ArticleGenes & development2015

Mechanism of regulation of 'chromosome kissing' induced by Fob1 and its physiological significance.

Malay Choudhury, Shamsu Zaman, James C Jiang, S Michal Jazwinski, Deepak Bastia

Abstract read
In one paragraph

Article in Genes & development, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Keeping ribosomal DNA intact: a repeating challenge.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2019
    Review
  5. Article
  6. Review
  7. Review
  8. Article
  9. Phosphorylation of CMG helicase and Tof1 is required for programmed fork arrest.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Malay ChoudhuryDepartment of Biochemistry and Molecular Biology, Medical University of South Carolina, Charleston, South Carolina 29425, USA;
Shamsu ZamanDepartment of Biochemistry and Molecular Biology, Medical University of South Carolina, Charleston, South Carolina 29425, USA;
James C JiangTulane Center for Aging, Department of Medicine, Tulane University School of Medicine, New Orleans, Louisiana 70112, USA.
S Michal JazwinskiTulane Center for Aging, Department of Medicine, Tulane University School of Medicine, New Orleans, Louisiana 70112, USA.
Deepak BastiaDepartment of Biochemistry and Molecular Biology, Medical University of South Carolina, Charleston, South Carolina 29425, USA; bastia@musc.edu.

Funding

The role of the CMV-associated reactive oxygen species in age-relatedP20GM103629 · NIGMS · TULANE UNIVERSITY OF LOUISIANA · PI JAZWINSKI, S MICHAL · 2012 to 2021
$22.4M
SOUTH CAROLINA CLINICAL & TRANSLATIONAL RESEARCH INSTITUTE (SCTR)UL1RR029882 · NCRR · MEDICAL UNIVERSITY OF SOUTH CAROLINA · PI BRADY, KATHLEEN T. · 2009 to 2011
$10.1M
CELLULAR AGING IN A YEAST MODEL SYSTEMR37AG006168 · NIA · TULANE UNIVERSITY OF LOUISIANA · PI JAZWINSKI, S MICHAL · 1994 to 2016
$5.0M
Control of Programmed Replication fork Arrest by Chromosome KissingR01GM098013 · NIGMS · MEDICAL UNIVERSITY OF SOUTH CAROLINA · PI BASTIA, DEEPAK · 2011 to 2014
$1.6M
CELLULAR AGING IN A YEAST MODEL SYSTEMR01AG006168 · NIA · LOUISIANA STATE UNIV HSC NEW ORLEANS · PI JAZWINSKI, S MICHAL · 1986 to 1994
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NCRR NIH HHS UL1 RR029882NCRR NIH HHS UL1RR029882NIA NIH HHS AG006168NIA NIH HHS R37 AG006168NIGMS NIH HHS GM-098013NIGMS NIH HHS P20 GM103629NIGMS NIH HHS R01 GM098013
6 · The paper itself

Abstract

Protein-mediated "chromosome kissing" between two DNA sites in trans (or in cis) is known to facilitate three-dimensional control of gene expression and DNA replication. However, the mechanisms of regulation of the long-range interactions are unknown. Here, we show that the replication terminator protein Fob1 of Saccharomyces cerevisiae promoted chromosome kissing that initiated rDNA recombination and controlled the replicative life span (RLS). Oligomerization of Fob1 caused synaptic (kissing) interactions between pairs of terminator (Ter) sites that initiated recombination in rDNA. Fob1 oligomerization and Ter-Ter kissing were regulated by intramolecular inhibitory interactions between the C-terminal domain (C-Fob1) and the N-terminal domain (N-Fob1). Phosphomimetic substitutions of specific residues of C-Fob1 counteracted the inhibitory interaction. A mutation in either N-Fob1 that blocked Fob1 oligomerization or C-Fob1 that blocked its phosphorylation antagonized chromosome kissing and recombination and enhanced the RLS. The results provide novel insights into a mechanism of regulation of Fob1-mediated chromosome kissing.

Indexed as

Chromosomes, FungalDNA-Binding ProteinsDNA ReplicationDNA, RibosomalGene Expression Regulation, FungalMutationPhosphorylationProtein Structure, TertiaryRecombination, GeneticSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsDNA-Binding ProteinsDNA, RibosomalFOB1 protein, S cerevisiaeSaccharomyces cerevisiae Proteinsautoinhibitory controlchromosome kissingprotein oligomerizationrecombinationreplication terminationreplication terminator proteinreplicative life span

Identifiers

PMID26063576
PMCPMC4470286

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.