Evidence map›Paper›PMID 26062552›Full record

ArticleMolecules and cells2015

Identification of Protein Markers Specific for Papillary Renal Cell Carcinoma Using Imaging Mass Spectrometry.

Chan Hyun Na, Ji Hye Hong, Wan Sup Kim, Selina Rahman Shanta, Joo Yong Bang, Dongmin Park, Hark Kyun Kim, Kwang Pyo Kim

Open access · diamondAbstract read
In one paragraph

Article in Molecules and cells, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 36 citations in OpenAlex.

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  7. Imaging the kidney: from light to super-resolution microscopy.Nephrology, dialysis, transplantation : official publication of the European Dialysis and Transplant Association - European Renal Association · 2021
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Chan Hyun NaDepartment of Applied Chemistry, College of Applied Sciences, Kyung Hee University, Yongin 446-701, Korea.
Ji Hye HongDepartment of Applied Chemistry, College of Applied Sciences, Kyung Hee University, Yongin 446-701, Korea.
Wan Sup KimDepartment of Pathology, Konkuk University School of Medicine, Seoul 143-701, Korea.
Selina Rahman ShantaDepartment of Applied Chemistry, College of Applied Sciences, Kyung Hee University, Yongin 446-701, Korea.
Joo Yong BangDepartment of Applied Chemistry, College of Applied Sciences, Kyung Hee University, Yongin 446-701, Korea.
Dongmin ParkNational Cancer Center, Goyang, 410-769, Korea.
Hark Kyun KimNational Cancer Center, Goyang, 410-769, Korea.
Kwang Pyo KimDepartment of Applied Chemistry, College of Applied Sciences, Kyung Hee University, Yongin 446-701, Korea.
Kyung Hee University · KRNational Cancer Center · KRInstitute of Natural Science · KPKonkuk University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Since the emergence of proteomics methods, many proteins specific for renal cell carcinoma (RCC) have been identified. Despite their usefulness for the specific diagnosis of RCC, such proteins do not provide spatial information on the diseased tissue. Therefore, the identification of cancer-specific proteins that include information on their specific location is needed. Recently, matrix-assisted laser desorption ionization (MALDI) mass spectrometry (MS) based imaging mass spectrometry (IMS) has emerged as a new tool for the analysis of spatial distribution as well as identification of either proteins or small molecules in tissues. In this report, surgical tissue sections of papillary RCC were analyzed using MALDI-IMS. Statistical analysis revealed several discriminative cancer-specific m/z-species between normal and diseased tissues. Among these m/z-species, two particular proteins, S100A11 and ferritin light chain, which are specific for papillary RCC cancer regions, were successfully identified using LC-MS/MS following protein extraction from independent RCC samples. The expressions of S100A11 and ferritin light chain were further validated by immunohistochemistry of human tissues and tissue microarrays (TMAs) of RCC. In conclusion, MALDI-IMS followed by LC-MS/MS analysis in human tissue identified that S100A11 and ferritin light chain are differentially expressed proteins in papillary RCC cancer regions.

Indexed as

AdultBiomarkers, TumorCarcinoma, Renal CellCell Line, TumorFerritinsHumansMaleMiddle AgedNeoplasm StagingS100 ProteinsSpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationBiomarkers, TumorFerritinsS100A11 protein, humanS100 ProteinsbiomarkerLC-MS/MSMALDI IMSMALDI TOFpapillary renal cell carcinomaproteomic analysis

Identifiers

PMID26062552
PMCPMC4507028
OpenAlexW2404549961

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.