Evidence map›Paper›PMID 26062451›Full record

ArticleScientific reports2015

The structure of the folded domain from the signature multifunctional protein ICP27 from herpes simplex virus-1 reveals an intertwined dimer.

Richard B Tunnicliffe, Mitchell Schacht, Colin Levy, Thomas A Jowitt, Rozanne M Sandri-Goldin, Alexander P Golovanov

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 25 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Review
  6. Article
  7. HSV-1 ICP0 Dimer Domain Adopts a Novel β-barrel Fold.bioRxiv : the preprint server for biology · 2024
    Article
  8. Article
  9. Article
  10. Widespread remodeling of the mProceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Richard B TunnicliffeManchester Institute of Biotechnology, The University of Manchester, Manchester, UK.
Mitchell SchachtDepartment of Microbiology and Molecular Genetics, School of Medicine, University of California, Irvine, USA.
Colin LevyManchester Institute of Biotechnology, The University of Manchester, Manchester, UK.
Thomas A JowittFaculty of Life Sciences, The University of Manchester, Manchester, UK.
Rozanne M Sandri-GoldinDepartment of Microbiology and Molecular Genetics, School of Medicine, University of California, Irvine, USA.
Alexander P GolovanovManchester Institute of Biotechnology, The University of Manchester, Manchester, UK.
University of Manchester · GBUniversity of California, Irvine · US

Funding

Virus-host interactions: a multi-scale training programT32AI007319 · NIAID · UNIVERSITY OF CALIFORNIA-IRVINE · PI SEMLER, BERT L, SHI, YONGSHENG · 1988 to 2024
$2.4M
Role of cooperative interactions of HSV multifunctional protein ICP27R01AI107803 · NIAID · UNIVERSITY OF CALIFORNIA-IRVINE · PI GOLOVANOV, ALEXANDER P., SANDRI-GOLDIN, ROZANNE M · 2013 to 2017
$1.6M
NIAID NIH HHS AI107803NIAID NIH HHS R01 AI107803NIAID NIH HHS T32 AI007319Wellcome Trust 088785
6 · The paper itself

Abstract

Herpesviruses cause life-long infections by evading the host immune system and establishing latent infections. All mammalian herpesviruses express an essential multifunctional protein that is typified by ICP27 encoded by Herpes Simplex Virus 1. The only region that is conserved among the diverse members of the ICP27 family is a predicted globular domain that has been termed the ICP27 homology domain. Here we present the first crystal structure of the ICP27 homology domain, solved to 1.9 Å resolution. The protein is a homo-dimer, adopting a novel intertwined fold with one CHCC zinc-binding site per monomer. The dimerization, which was independently confirmed by SEC-MALS and AUC, is stabilized by an extensive network of intermolecular contacts, and a domain-swap involving the two N-terminal helices and C-terminal tails. Each monomer contains a lid motif that can clamp the C-terminal tail of its dimeric binding partner against its globular core, without forming any distinct secondary structure elements. The binding interface was probed with point mutations, none of which had a noticeable effect on dimer formation; however deletion of the C-terminal tail region prevented dimer formation in vivo. The structure provides a template for future biochemical studies and modelling of ICP27 homologs from other herpesviruses.

Indexed as

Amino Acid SequenceBinding SitesCell Line, TumorCrystallography, X-RayDimerizationHeLa CellsHerpesvirus 1, HumanHumansImmediate-Early ProteinsProtein Structure, TertiaryZincICP27 protein, human herpesvirus 1Immediate-Early ProteinsZinc

Identifiers

PMID26062451
PMCPMC4650695
OpenAlexW2282902681

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.