Evidence map›Paper›PMID 26061275›Full record

ArticlePLoS genetics2015

Necrotic Cells Actively Attract Phagocytes through the Collaborative Action of Two Distinct PS-Exposure Mechanisms.

Zao Li, Victor Venegas, Yuji Nagaoka, Eri Morino, Prashant Raghavan, Anjon Audhya, Yoshinobu Nakanishi, Zheng Zhou

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 46 citations in OpenAlex.

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  14. Worms, Fat, and Death:Metabolites · 2021
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  15. Article
  16. Frontiers in immunology · 2021
    Article
  17. Article
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  19. Flipping the dogma - phosphatidylserine in non-apoptotic cell death.Cell communication and signaling : CCS · 2019
    Review
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Zao LiVerna and Marrs McLean Department of Biochemistry and Molecular Biology, Baylor College of Medicine, Houston, Texas, United States of America.
Victor VenegasVerna and Marrs McLean Department of Biochemistry and Molecular Biology, Baylor College of Medicine, Houston, Texas, United States of America.
Yuji Nagaokathe Graduate School of Natural Science and Technology, Kanazawa University, Shizenken, Kakuma-machi, Kanazawa, Ishikawa, Japan.
Eri Morinothe School of Pharmacy, Kanazawa University, Shizenken, Kakuma-machi, Kanazawa, Ishikawa, Japan.
Prashant RaghavanVerna and Marrs McLean Department of Biochemistry and Molecular Biology, Baylor College of Medicine, Houston, Texas, United States of America.
Anjon AudhyaDepartment of Biomolecular Chemistry, University of Wisconsin-Madison, School of Medicine and Public Health, Madison, Wisconsin, United States of America.
Yoshinobu Nakanishithe Graduate School of Natural Science and Technology, Kanazawa University, Shizenken, Kakuma-machi, Kanazawa, Ishikawa, Japan; the School of Pharmacy, Kanazawa University, Shizenken, Kakuma-machi, Kanazawa, Ishikawa, Japan; the Graduate School of Medical Sciences, Kanazawa University, Shizenken, Kakuma-machi, Kanazawa, Ishikawa, Japan.
Zheng ZhouVerna and Marrs McLean Department of Biochemistry and Molecular Biology, Baylor College of Medicine, Houston, Texas, United States of America.
Baylor College of Medicine · USKanazawa University · JPUniversity of Wisconsin–Madison · US

Funding

Recognition of Apoptotic Cells for Their PhagocytosisR01GM067848 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI ZHOU, ZHENG · 2003 to 2021
$5.7M
Molecular Mechanisms that Regulate Lysosomal Protein TransportR01GM088151 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI AUDHYA, ANJON · 2010 to 2019
$3.0M
Regulatory mechanisms that control vesicle secretion at the endoplasmic reticulumR01GM110567 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI AUDHYA, ANJON · 2015 to 2019
$1.8M
RECOGNITION OF APOPTOTIC AND NECROTIC CELLS BY THEIR PHAGOCYTESR01GM104279 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI ZHOU, ZHENG · 2014 to 2017
$1.2M
NIGMS NIH HHS GM067848NIGMS NIH HHS GM088151NIGMS NIH HHS GM104279NIGMS NIH HHS GM110567NIGMS NIH HHS R01 GM067848NIGMS NIH HHS R01 GM088151NIGMS NIH HHS R01 GM104279NIGMS NIH HHS R01 GM110567
6 · The paper itself

Abstract

Necrosis, a kind of cell death closely associated with pathogenesis and genetic programs, is distinct from apoptosis in both morphology and mechanism. Like apoptotic cells, necrotic cells are swiftly removed from animal bodies to prevent harmful inflammatory and autoimmune responses. In the nematode Caenorhabditis elegans, gain-of-function mutations in certain ion channel subunits result in the excitotoxic necrosis of six touch neurons and their subsequent engulfment and degradation inside engulfing cells. How necrotic cells are recognized by engulfing cells is unclear. Phosphatidylserine (PS) is an important apoptotic-cell surface signal that attracts engulfing cells. Here we observed PS exposure on the surface of necrotic touch neurons. In addition, the phagocytic receptor CED-1 clusters around necrotic cells and promotes their engulfment. The extracellular domain of CED-1 associates with PS in vitro. We further identified a necrotic cell-specific function of CED-7, a member of the ATP-binding cassette (ABC) transporter family, in promoting PS exposure. In addition to CED-7, anoctamin homolog-1 (ANOH-1), the C. elegans homolog of the mammalian Ca(2+)-dependent phospholipid scramblase TMEM16F, plays an independent role in promoting PS exposure on necrotic cells. The combined activities from CED-7 and ANOH-1 ensure efficient exposure of PS on necrotic cells to attract their phagocytes. In addition, CED-8, the C. elegans homolog of mammalian Xk-related protein 8 also makes a contribution to necrotic cell-removal at the first larval stage. Our work indicates that cells killed by different mechanisms (necrosis or apoptosis) expose a common "eat me" signal to attract their phagocytic receptor(s); furthermore, unlike what was previously believed, necrotic cells actively present PS on their outer surfaces through at least two distinct molecular mechanisms rather than leaking out PS passively.

Indexed as

PhagocytosisAnimalsApoptosisATP-Binding Cassette TransportersCaenorhabditis elegansCaenorhabditis elegans ProteinsMembrane ProteinsNecrosisPhagocytesPhosphatidylserinesPhospholipid Transfer ProteinsATP-Binding Cassette TransportersCaenorhabditis elegans Proteinsced-1 protein, C elegansCED-7 protein, C elegansCED-8 protein, C elegansMembrane ProteinsPhosphatidylserinesPhospholipid Transfer Proteins

Identifiers

PMID26061275
PMCPMC4464654
OpenAlexW1527592070

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.