Evidence map›Paper›PMID 26060098›Full record

ArticleBulletin of mathematical biology2015

From Birds to Bacteria: Generalised Velocity Jump Processes with Resting States.

Jake P Taylor-King, E Emiel van Loon, Gabriel Rosser, S Jon Chapman

Abstract read
In one paragraph

Article in Bulletin of mathematical biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Jake P Taylor-KingMathematical Institute, University of Oxford, Andrew Wiles Building, Radcliffe Observatory Quarter, Woodstock Road, Oxford, OX2 6GG, UK, jake.taylor-king@sjc.ox.ac.uk.
E Emiel van Loon
Gabriel Rosser
S Jon Chapman

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

There are various cases of animal movement where behaviour broadly switches between two modes of operation, corresponding to a long-distance movement state and a resting or local movement state. Here, a mathematical description of this process is formulated, adapted from Friedrich et al. (Phys Rev E, 74:041103, 2006b). The approach allows the specification any running or waiting time distribution along with any angular and speed distributions. The resulting system of integro-partial differential equations is tumultuous, and therefore, it is necessary to both simplify and derive summary statistics. An expression for the mean squared displacement is derived, which shows good agreement with experimental data from the bacterium Escherichia coli and the gull Larus fuscus. Finally, a large time diffusive approximation is considered via a Cattaneo approximation (Hillen in Discrete Continuous Dyn Syst Ser B, 5:299-318, 2003). This leads to the novel result that the effective diffusion constant is dependent on the mean and variance of the running time distribution but only on the mean of the waiting time distribution.

Indexed as

Bacterial Physiological PhenomenaAnimal MigrationAnimalsBirdsCharadriiformesComputer SimulationEscherichia coliMathematical ConceptsModels, BiologicalMovement

Identifiers

PMID26060098
PMCPMC4548017

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.