Evidence map›Paper›PMID 26059272›Full record

ArticleScientific reports2015

Identification of a critical determinant that enables efficient fatty acid synthesis in oleaginous fungi.

Haiqin Chen, Guangfei Hao, Lei Wang, Hongchao Wang, Zhennan Gu, Liming Liu, Hao Zhang, Wei Chen, Yong Q Chen

Open access · goldAbstract readValidation Study
In one paragraph

Article in Scientific reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
5.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 97 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. Microbial Musings - August 2021.Microbiology (Reading, England) · 2021
    Article
  9. Molecules (Basel, Switzerland) · 2021
    Review
  10. Review
  11. Article
  12. Review
  13. Characterization of NADFrontiers in nutrition · 2021
    Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Genetic Modification ofInternational journal of molecular sciences · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Haiqin Chen1] State Key Laboratory of Food Science and Technology, School of Food Science and Technology, Jiangnan University, Wuxi 214122, P.R. China [2] The Synergistic Innovation Center for Food Safety and Nutrition, Wuxi 214122, P.R. China.
Guangfei HaoState Key Laboratory of Food Science and Technology, School of Food Science and Technology, Jiangnan University, Wuxi 214122, P.R. China.
Lei WangTEDA School of Biological Sciences and Biotechnology, Nankai University, Tianjin Economic-Technological Development Area, Tianjin 300457, P. R. China.
Hongchao Wang1] State Key Laboratory of Food Science and Technology, School of Food Science and Technology, Jiangnan University, Wuxi 214122, P.R. China [2] The Synergistic Innovation Center for Food Safety and Nutrition, Wuxi 214122, P.R. China.
Zhennan Gu1] State Key Laboratory of Food Science and Technology, School of Food Science and Technology, Jiangnan University, Wuxi 214122, P.R. China [2] The Synergistic Innovation Center for Food Safety and Nutrition, Wuxi 214122, P.R. China [3] Department of Cancer Biology, Wake Forest University School of Medicine, Winston-Salem, NC 27157, USA.
Liming LiuState Key Laboratory of Food Science and Technology, School of Food Science and Technology, Jiangnan University, Wuxi 214122, P.R. China.
Hao Zhang1] State Key Laboratory of Food Science and Technology, School of Food Science and Technology, Jiangnan University, Wuxi 214122, P.R. China [2] The Synergistic Innovation Center for Food Safety and Nutrition, Wuxi 214122, P.R. China.
Wei Chen1] State Key Laboratory of Food Science and Technology, School of Food Science and Technology, Jiangnan University, Wuxi 214122, P.R. China [2] The Synergistic Innovation Center for Food Safety and Nutrition, Wuxi 214122, P.R. China.
Yong Q Chen1] State Key Laboratory of Food Science and Technology, School of Food Science and Technology, Jiangnan University, Wuxi 214122, P.R. China [2] The Synergistic Innovation Center for Food Safety and Nutrition, Wuxi 214122, P.R. China [3] Department of Cancer Biology, Wake Forest University School of Medicine, Winston-Salem, NC 27157, USA.
Jiangnan University · CNState Key Laboratory of Food Science and Technology · CNTianjin Economic-Technological Development Area · CN

Funding

Mechanisms of Fish Oil Supplement in Prevention of Pros*R01CA107668 · NCI · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI CHEN, YONG Q · 2004 to 2014
$2.9M
Omega-3 PUFA-gene interaction in prostate cancerR01CA163273 · NCI · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI CHEN, YONG Q · 2012 to 2016
$1.8M
NCI NIH HHS R01 CA107668NCI NIH HHS R01CA107668NCI NIH HHS R01 CA163273NCI NIH HHS R01CA163273
6 · The paper itself

Abstract

Microorganisms are valuable resources for lipid production. What makes one microbe but not the other able to efficiently synthesize and accumulate lipids is poorly understood. In the present study, global gene expression prior to and after the onset of lipogenesis was determined by transcriptomics using the oleaginous fungus Mortierella alpina as a model system. A core of 23 lipogenesis associated genes was identified and their expression patterns shared a high similarity among oleaginous microbes Chlamydomonas reinhardtii, Mucor circinelloides and Rhizopus oryzae but was dissimilar to the non-oleaginous Aspergillus nidulans. Unexpectedly, Glucose-6-phosphate dehydrogenase (G6PD) and 6-phosphogluconate dehydrogenase (PGD) in the pentose phosphate pathway (PPP) were found to be the NADPH producers responding to lipogenesis in the oleaginous microbes. Their role in lipogenesis was confirmed by a knockdown experiment. Our results demonstrate, for the first time, that the PPP plays a significant role during fungal lipogenesis. Up-regulation of NADPH production by the PPP, especially G6PD, may be one of the critical determinants that enables efficiently fatty acid synthesis in oleaginous microbes.

Indexed as

Fatty AcidsFungiGene Expression Regulation, FungalGenes, FungalFatty Acids

Identifiers

PMID26059272
PMCPMC4462047
OpenAlexW617905279

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.