ArticleThe ISME journal2016
Microbial and biochemical basis of a Fusarium wilt-suppressive soil.
Article in The ISME journal, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 172 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
172 citing papers in PubMed.
- Dynamic Assembly and Multifunctional Roles of Plant Endophytic Microbiomes.Microorganisms · 2026Review
- Review
- Rhizosphere microbiome and calcium synergy drive suppression of Ceratocystis paradoxa in tropical coconut soils.Archives of microbiology · 2026Article
- Discovery of specific rhizosphere bacteriaScience advances · 2026Article
- Insect herbivory reshapes rhizosphere bacterial and fungal networks in a stage-specific manner.Applied and environmental microbiology · 2026Article
- Screening and identification of a new antimicrobial,RSC advances · 2026Article
- Protective holobiome promotes strawberry tolerance of biotic stresses.Stress biology · 2026Review
- Consecutive melon monocropping is associated with microbial community homogenization and reduced bacterial network complexity.Frontiers in microbiology · 2026Article
- Leveraging soil microbiome diversity for the management of highly virulentFrontiers in microbiology · 2026Article
- Genotype-specific root morphology and metabolic traits shape bacterial communities and tolerance to Fusarium root rot in wheat.PloS one · 2026Article
- Greenhouse and field evaluation of bacterial endophytes fromFrontiers in plant science · 2026Article
- Fluorescent Pseudomonas spp. from suppressive and conducive soils share genomic and functional traits relevant to Fusarium graminearum disease suppression.BMC genomics · 2025Article
- Silica nanoparticles suppress fungal pathogenic allies to alleviate Astragalus root rot.Microbiome · 2025Article
- Perspectives on microbial community changes produced by Hermitia illucens frass and their impact on soil suppression against Fusarium oxysporum f. sp. lactucae.Pest management science · 2025Article
- Dual-functionality of Nocardiopsis alba B57 in biocontrol and plant growth: a metabolomic approach to agricultural sustainability.NPJ biofilms and microbiomes · 2025Article
- Article
- Rapid and sustained differentiation of disease-suppressive phyllosphere microbiomes in tomato following experimental microbiome selection.Environmental microbiome · 2025Article
- Root Rot Disease Biocontrol and Microbiome Community Modulation byJournal of microbiology and biotechnology · 2025Article
- Identifying rhizosphere bacteria and potential mechanisms linked to compost suppressiveness towards Fusarium oxysporum.Environmental microbiome · 2025Article
- Downy mildew disease-suppressive soils transmit a protective core microbiome to the phyllosphere.The ISME journal · 2025Article
112 more citing papers are in PubMed but not listed here.
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
16 authors.
Funding
Abstract
Crops lack genetic resistance to most necrotrophic pathogens. To compensate for this disadvantage, plants recruit antagonistic members of the soil microbiome to defend their roots against pathogens and other pests. The best examples of this microbially based defense of roots are observed in disease-suppressive soils in which suppressiveness is induced by continuously growing crops that are susceptible to a pathogen, but the molecular basis of most is poorly understood. Here we report the microbial characterization of a Korean soil with specific suppressiveness to Fusarium wilt of strawberry. In this soil, an attack on strawberry roots by Fusarium oxysporum results in a response by microbial defenders, of which members of the Actinobacteria appear to have a key role. We also identify Streptomyces genes responsible for the ribosomal synthesis of a novel heat-stable antifungal thiopeptide antibiotic inhibitory to F. oxysporum and the antibiotic's mode of action against fungal cell wall biosynthesis. Both classical- and community-oriented approaches were required to dissect this suppressive soil from the field to the molecular level, and the results highlight the role of natural antibiotics as weapons in the microbial warfare in the rhizosphere that is integral to plant health, vigor and development.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.