Evidence map›Paper›PMID 26056378›Full record

ArticleSchizophrenia bulletin2016

Correspondence of DNA Methylation Between Blood and Brain Tissue and Its Application to Schizophrenia Research.

Esther Walton, Johanna Hass, Jingyu Liu, Joshua L Roffman, Fabio Bernardoni, Veit Roessner, Matthias Kirsch, Gabriele Schackert, Vince Calhoun, Stefan Ehrlich

Abstract read
In one paragraph

Article in Schizophrenia bulletin, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 163 papers, 18 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
163citing papers in PubMed, 18 pooled it
14.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

163 citing papers in PubMed, 18 syntheses or guidelines pooled it, 284 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Pooled it
  5. Pooled it
  6. Pooled it
  7. Pooled it
  8. Pooled it
  9. Pooled it
  10. Pooled it
  11. Pooled it
  12. Pooled it
  13. Pooled it
  14. Pooled it
  15. Pooled it
  16. Pooled it
  17. Pooled it
  18. Pooled it
  19. Genetic and epigenetic signatures associated with plasma oxytocin levels in children and adolescents with autism spectrum disorder.Autism research : official journal of the International Society for Autism Research · 2023
    Trial
  20. Article

103 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 3 countries.

Esther WaltonDepartment of Child and Adolescent Psychiatry, Translational Developmental Neuroscience Section, Faculty of Medicine of the TU Dresden, Dresden, Germany; Department of Psychology, Institute of Psychology, Psychiatry and Neuroscience, King's College London, London, UK;
Johanna HassDepartment of Child and Adolescent Psychiatry, Translational Developmental Neuroscience Section, Faculty of Medicine of the TU Dresden, Dresden, Germany; Institute of Tropical Medicine, Eberhard Karls University, Tübingen, Germany.
Jingyu LiuThe Mind Research Network, Albuquerque, NM;
Joshua L RoffmanMGH/MIT/HMS Martinos Center for Biomedical Imaging, Massachusetts General Hospital, Charlestown, MA; Department of Psychiatry, Massachusetts General Hospital, Boston, MA;
Fabio BernardoniDepartment of Child and Adolescent Psychiatry, Translational Developmental Neuroscience Section, Faculty of Medicine of the TU Dresden, Dresden, Germany;
Veit RoessnerDepartment of Child and Adolescent Psychiatry, Translational Developmental Neuroscience Section, Faculty of Medicine of the TU Dresden, Dresden, Germany;
Matthias KirschDepartment of Neurosurgery, Faculty of Medicine of the TU Dresden, Dresden, Germany; Center for Regenerative Therapies Dresden (CRTD), DFG Research Center and Cluster of Excellence at the TU Dresden, Dresden, Germany;
Gabriele SchackertDepartment of Neurosurgery, Faculty of Medicine of the TU Dresden, Dresden, Germany;
Vince CalhounThe Mind Research Network, Albuquerque, NM; Department of Electrical and Computer Engineering, University of New Mexico, Albuquerque, NM.
Stefan EhrlichDepartment of Child and Adolescent Psychiatry, Translational Developmental Neuroscience Section, Faculty of Medicine of the TU Dresden, Dresden, Germany; MGH/MIT/HMS Martinos Center for Biomedical Imaging, Massachusetts General Hospital, Charlestown, MA; Department of Psychiatry, Massachusetts General Hospital, Boston, MA; transden.lab@uniklinikum-dresden.de.
TU Dresden · DEMind Research Network · USAthinoula A. Martinos Center for Biomedical Imaging · USMassachusetts General Hospital · USUniversity of Tübingen · DE

Funding

HARVARD CLINICAL AND TRANSLATIONAL SCIENCE CENTER (UL1)UL1RR025758 · NCRR · HARVARD MEDICAL SCHOOL · PI NADLER, LEE MARSHALL · 2008 to 2011
$91.4M
FUNCTION BIRNU24RR021992 · NCRR · UNIVERSITY OF CALIFORNIA-IRVINE · PI POTKIN, STEVEN G · 2006 to 2010
$25.0M
ULTRAHIGH FIELD TECHNOLOGY FOR FUNCTIONAL IMAGINGP41RR014075 · NCRR · MASSACHUSETTS GENERAL HOSPITAL · PI ROSEN, BRUCE R · 1999 to 2011
$16.4M
Transcranial Direct Current Stimulation for Treatment of Auditory Verbal HalluciP20GM103472 · NIGMS · THE MIND RESEARCH NETWORK · PI SUI, JING · 2012 to 2017
$14.3M
Multivariate methods for identifying multitask/multimodal brain imaging biomarkersR01EB006841 · NIBIB · THE MIND RESEARCH NETWORK · PI VINCE D CALHOUN, Sergey Plis · 2007 to 2026
$9.8M
Informed Data-Driven Fusion of Behavior, Brain Function, and GenesR01EB005846 · NIBIB · THE MIND RESEARCH NETWORK · PI CALHOUN, VINCE D · 2005 to 2016
$5.5M
Multi-group semi-blind ICA of fMRIR01EB000840 · NIBIB · THE MIND RESEARCH NETWORK · PI CALHOUN, VINCE D · 2003 to 2011
$3.2M
Unified multivariate data-driven solutions for static and dynamic brain connectivityR01EB020407 · NIBIB · THE MIND RESEARCH NETWORK · PI ADALI, TULAY, CALHOUN, VINCE D · 2015 to 2018
$2.7M
Functional Connectivity in SchizophreniaK08MH068540 · NIMH · UNIVERSITY OF MINNESOTA TWIN CITIES · PI WHITE, TONYA · 2004 to 2008
$896k
Medical Research Council MC_UU_12013/1Medical Research Council MC_UU_12013/2NCRR NIH HHS 1U24 RR021382ANCRR NIH HHS M01 RR025758-01NCRR NIH HHS P41RR14075NCRR NIH HHS U24RR021992-01NCRR NIH HHS UL1 RR025758NIBIB NIH HHS 2R01-EB000840NIBIB NIH HHS R01 EB005846NIBIB NIH HHS R01 EB006841NIBIB NIH HHS R01 EB020407NIGMS NIH HHS 2P20GM103472-06NIGMS NIH HHS P20-GM103472NIMH NIH HHS K08 MH068540
6 · The paper itself

Abstract

Given the difficulty of procuring human brain tissue, a key question in molecular psychiatry concerns the extent to which epigenetic signatures measured in more accessible tissues such as blood can serve as a surrogate marker for the brain. Here, we aimed (1) to investigate the blood-brain correspondence of DNA methylation using a within-subject design and (2) to identify changes in DNA methylation of brain-related biological pathways in schizophrenia.We obtained paired blood and temporal lobe biopsy samples simultaneously from 12 epilepsy patients during neurosurgical treatment. Using the Infinium 450K methylation array we calculated similarity of blood and brain DNA methylation for each individual separately. We applied our findings by performing gene set enrichment analyses (GSEA) of peripheral blood DNA methylation data (Infinium 27K) of 111 schizophrenia patients and 122 healthy controls and included only Cytosine-phosphate-Guanine (CpG) sites that were significantly correlated across tissues.Only 7.9% of CpG sites showed a statistically significant, large correlation between blood and brain tissue, a proportion that although small was significantly greater than predicted by chance. GSEA analysis of schizophrenia data revealed altered methylation profiles in pathways related to precursor metabolites and signaling peptides.Our findings indicate that most DNA methylation markers in peripheral blood do not reliably predict brain DNA methylation status. However, a subset of peripheral data may proxy methylation status of brain tissue. Restricting the analysis to these markers can identify meaningful epigenetic differences in schizophrenia and potentially other brain disorders.

Indexed as

CpG IslandsDNA MethylationEpigenesis, GeneticBiomarkersBrainHumansSchizophreniaBiomarkersbloodbraincorrelationcross-tissueDNA methylationschizophrenia

Identifiers

PMID26056378
PMCPMC4753587
OpenAlexW2256732880

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.