Evidence map›Paper›PMID 26055999›Full record

ArticleBMC research notes2015

PCSK5 mutation in a patient with the VACTERL association.

Yukio Nakamura, Shingo Kikugawa, Shoji Seki, Masahiko Takahata, Norimasa Iwasaki, Hidetomi Terai, Mitsuhiro Matsubara, Fumio Fujioka, Hidehito Inagaki, Tatsuya Kobayashi and 3 more

Open access · goldAbstract readCase Reports
In one paragraph

Article in BMC research notes, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.8field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 8 institutions in 2 countries.

Yukio NakamuraDepartment of Orthopaedic Surgery, Shinshu University School of Medicine, Matsumoto, Japan. yxn14@aol.jp.
Shingo KikugawaDNA Chip Research Inc., Kanagawa, Japan. s-kikugawa@dna-chip.co.jp.
Shoji SekiDepartment of Orthopaedic Surgery, Faculty of Medicine, University of Toyama, Toyama, Japan. seki@med.u-toyama.ac.jp.
Masahiko TakahataDepartment of Orthopaedic Surgery, Hokkaido University School of Medicine, Sapporo, Japan. takamasa@med.hokudai.ac.jp.
Norimasa IwasakiDepartment of Orthopaedic Surgery, Hokkaido University School of Medicine, Sapporo, Japan. niwasaki38@yahoo.co.jp.
Hidetomi TeraiDepartment of Orthopaedic Surgery, Osaka City University Graduate School of Medicine, Osaka, Japan. hterai@med.osaka-cu.ac.jp.
Mitsuhiro MatsubaraDepartment of Orthopaedic Surgery, Nagano Prefectural Children's Hospital, Azumino, Japan. matsubara7942@yahoo.co.jp.
Fumio FujiokaDepartment of Orthopaedic Surgery, Nagano Prefectural Children's Hospital, Azumino, Japan. fujioka-fumio-r@pref-nagano-hosp.jp.
Hidehito InagakiDivision of Molecular Genetics, Institute for Comprehensive Medical Science, Fujita Health University, Toyoake, Japan. hinagaki@fujita-hu.ac.jp.
Tatsuya KobayashiEndocrine Unit, Massachusetts General Hospital and Harvard Medical School, Boston, MA, USA. tkobayashi1@partners.org.
Tomoatsu KimuraDepartment of Orthopaedic Surgery, Faculty of Medicine, University of Toyama, Toyama, Japan. tkimura@med.u-toyama.ac.jp.
Hiroki KurahashiDivision of Molecular Genetics, Institute for Comprehensive Medical Science, Fujita Health University, Toyoake, Japan. kura@fujita-hu.ac.jp.
Hiroyuki KatoDepartment of Orthopaedic Surgery, Shinshu University School of Medicine, Matsumoto, Japan. hirokato@shinshu-u.ac.jp.
Fujita Health University · JPHokkaido University · JPNagano Children's Hospital · JPShinshu University · JPUniversity of Toyama · JPDNA Chip Research (Japan) · JPMassachusetts General Hospital · USOsaka City University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe VACTERL association is a typically sporadic, non-random collection of congenital anomalies that includes vertebral defects, anal atresia, cardiac defects, tracheoesophageal fistula with esophageal atresia, renal anomalies, and limb abnormalities. Although several chromosomal aberrations and gene mutations have been reported as disease-causative, these findings have been sparsely replicated to date. CASE PRESENTATION: In the present study, whole exome sequencing of a case with the VACTERL association uncovered a novel frameshift mutation in the PCSK5 gene, which has been reported as one of the causative genes for the VACTERL association. Although this mutation appears potentially pathogenic in its functional aspects, it was also carried by the healthy father. Furthermore, a database survey revealed several other deleterious variants in the PCSK5 gene in the general population.

conclusionsFurther studies are necessary to clarify the etiological role of the PCSK5 mutation in the VACTERL association.

Indexed as

Frameshift MutationAnal CanalChildDNA Mutational AnalysisEsophagusGenetic Predisposition to DiseaseHeart Defects, CongenitalHeredityHumansKidneyLimb Deformities, CongenitalMalePedigreePhenotypeProprotein Convertase 5SpinePCSK5 protein, humanProprotein Convertase 5

Identifiers

PMID26055999
PMCPMC4467638
OpenAlexW1823827921

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.