ArticleRice (New York, N.Y.)2014
Analysis of segregation distortion and its relationship to hybrid barriers in rice.
Article in Rice (New York, N.Y.), 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
25 citing papers in PubMed.
- QTL mapping of vernalization-insensitive and photoperiod-independent early flowering in yellow lupin (Frontiers in plant science · 2026Article
- Identification of qBK2.1, a novel QTL controlling rice resistance against Fusarium fujikuroi.Botanical studies · 2023Article
- Interspecific hybridization for transfer of hull-less seed trait from Cucurbita pepo to C. moschata.Scientific reports · 2023Article
- Construction of a high density genetic linkage map to define the locus conferring seedlessness from Mukaku Kishu mandarin.Frontiers in plant science · 2023Article
- Article
- Identification of quantitative trait loci for tillering, root, and shoot biomass at the maximum tillering stage in rice.Scientific reports · 2022Article
- Identification of a major QTL and genome-wide epistatic interactions for single vs. paired spikelets in a maize-teosinte FMolecular breeding : new strategies in plant improvement · 2022Article
- Fine Mapping of Two Interacting Loci for Transmission Ratio Distortion in Rice (Frontiers in plant science · 2022Article
- Understanding the Nature of Hybrid Sterility and Divergence of Asian Cultivated Rice.Frontiers in plant science · 2022Review
- Substitution Mapping of a Locus Responsible for Hybrid Breakdown in Populations Derived From Interspecific Introgression Line.Frontiers in plant science · 2021Article
- Mapping QTL hotspots associated with weed competitive traits in backcross population derived from Oryza sativa L. and O. glaberrima Steud.Scientific reports · 2020Article
- Recovery of Recurrent Parent Genome in a Marker-Assisted Backcrossing Against Rice Blast and Blight Infections Using Functional Markers and SSRs.Plants (Basel, Switzerland) · 2020Article
- Recurrent breakdown and rebalance of segregation distortion in the genomes: battle for the transmission advantage.aBIOTECH · 2020Review
- High-resolution genetic mapping of a novel bacterial blight resistance gene xa-45(t) identified from Oryza glaberrima and transferred to Oryza sativa.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2020Article
- Genetic Dissection and Validation of Chromosomal Regions for Transmission Ratio Distortion in Intersubspecific Crosses of Rice.Frontiers in plant science · 2020Article
- Mapping and Validation of QTLs for the Amino Acid and Total Protein Content in Brown Rice.Frontiers in genetics · 2020Article
- Cytogenetic and molecular genotyping in the allotetraploid Festuca pratensis × Lolium perenne hybrids.BMC genomics · 2019Article
- Patterns of Transmission Ratio Distortion in Interspecific Lettuce Hybrids Reveal a Sex-Independent Gametophytic Barrier.Genetics · 2019Article
- Genotyping-by-Sequencing Derived High-Density Linkage Map and its Application to QTL Mapping of Flag Leaf Traits in Bread Wheat.Scientific reports · 2017Article
- Genetic Architecture of a Rice Nested Association Mapping Population.G3 (Bethesda, Md.) · 2017Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
9 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundSegregation distortion (SD) is a frequently observed occurrence in mapping populations generated from crosses involving divergent genotypes. In the present study, ten genetic linkage maps constructed from reciprocal F2 and BC1F1 mapping populations derived from the parents Dasanbyeo (indica) and Ilpumbyeo (japonica) were used to identify the distribution, effect, and magnitude of the genetic factors underlying the mechanisms of SD between the two subspecies.
resultsSD loci detected in the present study were affected by male function, female function, and zygotic selection. The most pronounced SD loci were mapped to chromosome 3 (transmitted through male gametes), chromosome 5 (transmitted through male gametes), and chromosome 6 (transmitted through female gametes). The level of SD in BC1F1 populations which defined by chi-square value independence multiple tests was relatively low in comparison to F2 populations. Dasanbyeo alleles were transmitted at a higher frequency in both F2 and BC1F1 populations, suggesting that indica alleles are strongly favored in inter-subspecific crosses in rice. SD loci in the present study corresponded to previously reported loci for reproductive barriers. In addition, new SD loci were detected on chromosomes 2 and 12.
conclusionThe identification of the distribution of SD and the effect of genetic factors causing SD in genetic mapping populations provides an opportunity to survey the whole genome for new SD loci and their relationships to reproductive barriers. This provides a basis for future research on the elucidation of the genetic mechanisms underlying SD in rice, and will be useful in molecular breeding programs.
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.