Evidence map›Paper›PMID 26055718›Full record

ArticleThe Journal of biological chemistry2015

New Insights into the Coupling between Microtubule Depolymerization and ATP Hydrolysis by Kinesin-13 Protein Kif2C.

Weiyi Wang, Ting Shen, Raphael Guerois, Fuming Zhang, Hureshitanmu Kuerban, Yuncong Lv, Benoît Gigant, Marcel Knossow, Chunguang Wang

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed, 1 pooled it
1.3field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 1 synthesis or guideline pooled it, 34 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Modeling study of kinesin-13 MCAK microtubule depolymerase.European biophysics journal : EBJ · 2024
    Article
  6. Article
  7. Article
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  10. Article
  11. KIF2C promotes the proliferation of hepatocellular carcinoma cellsExperimental and therapeutic medicine · 2021
    Article
  12. These motors were made for walking.Protein science : a publication of the Protein Society · 2020
    Review
  13. Article
  14. Article
  15. Article
  16. Article
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  18. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Weiyi WangFrom the Institute of Protein Research, Tongji University, Shanghai 200092, China, the Institute for Integrative Biology of the Cell, CEA, CNRS, Université Paris-Sud, Gif-sur-Yvette 91198, France, and.
Ting ShenFrom the Institute of Protein Research, Tongji University, Shanghai 200092, China.
Raphael Gueroisthe Institute for Integrative Biology of the Cell, CEA, CNRS, Université Paris-Sud, Gif-sur-Yvette 91198, France, and the From CEA, Institut de Biologie et de la Technologies de Saclay (iBiTecS), Gif-sur-Yvette 91191, France.
Fuming ZhangFrom the Institute of Protein Research, Tongji University, Shanghai 200092, China.
Hureshitanmu KuerbanFrom the Institute of Protein Research, Tongji University, Shanghai 200092, China.
Yuncong LvFrom the Institute of Protein Research, Tongji University, Shanghai 200092, China.
Benoît Gigantthe Institute for Integrative Biology of the Cell, CEA, CNRS, Université Paris-Sud, Gif-sur-Yvette 91198, France, and benoit.gigant@i2bc.paris-saclay.fr.
Marcel Knossowthe Institute for Integrative Biology of the Cell, CEA, CNRS, Université Paris-Sud, Gif-sur-Yvette 91198, France, and marcel.knossow@i2bc.paris-saclay.fr.
Chunguang WangFrom the Institute of Protein Research, Tongji University, Shanghai 200092, China, chunguangwang@tongji.edu.cn.
Institute of Protein Research · RUInstitut de Biologie Intégrative de la Cellule · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Kinesin-13 proteins depolymerize microtubules in an ATP hydrolysis-dependent manner. The coupling between these two activities remains unclear. Here, we first studied the role of the kinesin-13 subfamily-specific loop 2 and of the KVD motif at the tip of this loop. Shortening the loop, the lysine/glutamate interchange and the additional Val to Ser substitution all led to Kif2C mutants with decreased microtubule-stimulated ATPase and impaired depolymerization capability. We rationalized these results based on a structural model of the Kif2C-ATP-tubulin complex derived from the recently determined structures of kinesin-1 bound to tubulin. In this model, upon microtubule binding Kif2C undergoes a conformational change governed in part by the interaction of the KVD motif with the tubulin interdimer interface. Second, we mutated to an alanine the conserved glutamate residue of the switch 2 nucleotide binding motif. This mutation blocks motile kinesins in a post-conformational change state and inhibits ATP hydrolysis. This Kif2C mutant still depolymerized microtubules and yielded complexes of one Kif2C with two tubulin heterodimers. These results demonstrate that the structural change of Kif2C-ATP upon binding to microtubule ends is sufficient for tubulin release, whereas ATP hydrolysis is not required. Overall, our data suggest that the conformation reached by kinesin-13s upon tubulin binding is similar to that of tubulin-bound, ATP-bound, motile kinesins but that this conformation is adapted to microtubule depolymerization.

Indexed as

Adenosine TriphosphatasesAdenosine TriphosphateAmino Acid SubstitutionBinding SitesCrystallography, X-RayHumansHydrolysisKinesinsMicrotubulesProtein BindingProtein ConformationProtein Structure, TertiarySerineStructure-Activity RelationshipTubulinValineAdenosine TriphosphatasesAdenosine TriphosphateKIF2C protein, humanKinesinsSerineTubulinValineATPaseconformational changekinesinmicrotubulemolecular motor

Identifiers

PMID26055718
PMCPMC4513128
OpenAlexW1490253953

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.