Evidence map›Paper›PMID 26053857›Full record

ArticlePloS one2015

Epigenetic Modifications of the PGC-1α Promoter during Exercise Induced Expression in Mice.

Timothy L Lochmann, Ravindar R Thomas, James P Bennett, Shirley M Taylor

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed, 1 pooled it
2.3field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 1 synthesis or guideline pooled it, 49 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. Review
  6. Mitochondrial Biogenesis in Skeletal Muscle.Advances in experimental medicine and biology · 2025
    Review
  7. Article
  8. Article
  9. DNA Methylation in the Adaptive Response to Exercise.Sports medicine (Auckland, N.Z.) · 2024
    Review
  10. Article
  11. Review
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Physical Activity and DNA Methylation in Humans.International journal of molecular sciences · 2021
    Review
  19. Article
  20. Multiple Levels of PGC-1α Dysregulation in Heart Failure.Frontiers in cardiovascular medicine · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Timothy L LochmannMassey Cancer Center, Virginia Commonwealth University, Richmond, Virginia, United States of America; Department of Microbiology and Immunology, Virginia Commonwealth University, Richmond, Virginia, United States of America.
Ravindar R ThomasParkinson's Center, Virginia Commonwealth University, Richmond, Virginia, United States of America.
James P BennettParkinson's Center, Virginia Commonwealth University, Richmond, Virginia, United States of America; Department of Neurology, Virginia Commonwealth University, Richmond, Virginia, United States of America; Department of Psychiatry, Virginia Commonwealth University, Richmond, Virginia, United States of America; Department of Physiology and Biophysics, Virginia Commonwealth University, Richmond, Virginia, United States of America.
Shirley M TaylorMassey Cancer Center, Virginia Commonwealth University, Richmond, Virginia, United States of America; Department of Microbiology and Immunology, Virginia Commonwealth University, Richmond, Virginia, United States of America.
Virginia Commonwealth University · US

Funding

Virus Vector Shared ResourceP30CA016059 · NCI · VIRGINIA COMMONWEALTH UNIVERSITY · PI Keri R Maher · 1985 to 2026
$51.0M
NCI NIH HHS P30 CA016059
6 · The paper itself

Abstract

The transcriptional coactivator, PGC-1α, is known for its role in mitochondrial biogenesis. Although originally thought to exist as a single protein isoform, recent studies have identified additional promoters which produce multiple mRNA transcripts. One of these promoters (promoter B), approximately 13.7 kb upstream of the canonical PGC-1α promoter (promoter A), yields alternative transcripts present at levels much lower than the canonical PGC-1α mRNA transcript. In skeletal muscle, exercise resulted in a substantial, rapid increase of mRNA of these alternative PGC-1α transcripts. Although the β2-adrenergic receptor was identified as a signaling pathway that activates transcription from PGC-1α promoter B, it is not yet known what molecular changes occur to facilitate PGC-1α promoter B activation following exercise. We sought to determine whether epigenetic modifications were involved in this exercise response in mouse skeletal muscle. We found that DNA hydroxymethylation correlated to increased basal mRNA levels from PGC-1α promoter A, but that DNA methylation appeared to play no role in the exercise-induced activation of PGC-1α promoter B. The level of the activating histone mark H3K4me3 increased with exercise 2-4 fold across PGC-1α promoter B, but remained unaltered past the canonical PGC-1α transcriptional start site. Together, these data show that epigenetic modifications partially explain exercise-induced changes in the skeletal muscle mRNA levels of PGC-1α isoforms.

Indexed as

Epigenesis, GeneticGene Expression RegulationPhysical Conditioning, AnimalPromoter Regions, GeneticAlternative SplicingAnimalsDNA MethylationExonsFemaleHistonesMicePeroxisome Proliferator-Activated Receptor Gamma Coactivator 1-alphaRNA, MessengerTranscription FactorsTranscription Initiation SiteHistonesPeroxisome Proliferator-Activated Receptor Gamma Coactivator 1-alphaPpargc1a protein, mouseRNA, MessengerTranscription Factors

Identifiers

PMID26053857
PMCPMC4460005
OpenAlexW568373222

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.