Evidence map›Paper›PMID 26052389›Full record

ArticleWorld journal of hepatology2015

Genetic ancestry analysis in non-alcoholic fatty liver disease patients from Brazil and Portugal.

Lourianne Nascimento Cavalcante, Jose Tadeu Stefano, Mariana V Machado, Daniel F Mazo, Fabiola Rabelo, Kiyoko Abe Sandes, Flair José Carrilho, Helena Cortez-Pinto, Andre Castro Lyra, Claudia P de Oliveira

Open access · diamondAbstract read
In one paragraph

Article in World journal of hepatology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 1 pooled it
0.4field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 1 synthesis or guideline pooled it, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 3 countries.

Lourianne Nascimento CavalcanteLourianne Nascimento Cavalcante, Andre Castro Lyra, Gastro-Hepatology Department, Hospital Sao Rafael, Salvador BA 41253-190, Brazil.
Jose Tadeu StefanoLourianne Nascimento Cavalcante, Andre Castro Lyra, Gastro-Hepatology Department, Hospital Sao Rafael, Salvador BA 41253-190, Brazil.
Mariana V MachadoLourianne Nascimento Cavalcante, Andre Castro Lyra, Gastro-Hepatology Department, Hospital Sao Rafael, Salvador BA 41253-190, Brazil.
Daniel F MazoLourianne Nascimento Cavalcante, Andre Castro Lyra, Gastro-Hepatology Department, Hospital Sao Rafael, Salvador BA 41253-190, Brazil.
Fabiola RabeloLourianne Nascimento Cavalcante, Andre Castro Lyra, Gastro-Hepatology Department, Hospital Sao Rafael, Salvador BA 41253-190, Brazil.
Kiyoko Abe SandesLourianne Nascimento Cavalcante, Andre Castro Lyra, Gastro-Hepatology Department, Hospital Sao Rafael, Salvador BA 41253-190, Brazil.
Flair José CarrilhoLourianne Nascimento Cavalcante, Andre Castro Lyra, Gastro-Hepatology Department, Hospital Sao Rafael, Salvador BA 41253-190, Brazil.
Helena Cortez-PintoLourianne Nascimento Cavalcante, Andre Castro Lyra, Gastro-Hepatology Department, Hospital Sao Rafael, Salvador BA 41253-190, Brazil.
Andre Castro LyraLourianne Nascimento Cavalcante, Andre Castro Lyra, Gastro-Hepatology Department, Hospital Sao Rafael, Salvador BA 41253-190, Brazil.
Claudia P de OliveiraLourianne Nascimento Cavalcante, Andre Castro Lyra, Gastro-Hepatology Department, Hospital Sao Rafael, Salvador BA 41253-190, Brazil.
Universidade de São Paulo · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

aimTo study the association between genetic ancestry, non-alcoholic fatty liver disease (NAFLD) metabolic characteristics in two cohorts of patients, from Brazil and Portugal.

methodsWe included 131 subjects from Brazil [(n = 45 with simple steatosis (S. Steatosis) and n = 86 with nonalcoholic steatohepatitis (NASH)] and 90 patients from Portugal (n = 66, S. Steatosis; n = 24, NASH). All patients had biopsy-proven NAFLD. In histologic evaluation NAFLD activity score was used to assess histology and more than 5 points defined NASH in this study. Patients were divided into two groups according to histology diagnosis: simple steatosis or non-alcoholic statohepatitis. Genetic ancestry was assessed using real-time polymerase chain reaction. Seven ancestry informative markers (AT3-I/D, LPL, Sb19.3, APO, FY-Null, PV92, and CKMM) with the greatest ethnic-geographical differential frequencies (≥ 48%) were used to define genetic ancestry. Data were analyzed using R PROJECTS software. Ancestry allele frequencies between groups were analyzed by GENEPOP online and the estimation of genetic ancestry contribution was evaluated by ADMIX-95 software. The 5% alpha-error was considered as significant (P < 0.05).

resultsIn the Brazilian sample, NASH was significantly more frequent among the elderly patients with diabetes (NASH 56 ± 1.1 years old vs S. Steatosis 51 ± 1.5 years old, P = 3.7 x 10(-9)), dyslipidemia (NASH 63% vs S. Steatosis 37%, P = 0.009), higher fasting glucose levels (NASH 124 ± 5.2 vs S. Steatosis 106 ± 5.3, P = 0.001) and Homeostatic Model of Assessment index > 2.5 [NASH 5.3 (70.8%) vs S. Steatosis 4.6 (29.2%) P = 0.04]. In the Portuguese study population, dyslipidemia was present in all patients with NASH (P = 0.03) and hypertension was present in a larger percentage of subjects in the S. Steatosis group (P = 0.003, respectively). The genetic ancestry contribution among Brazilian and Portuguese individuals with NASH was similar to those with S. Steatosis from each cohort (Brazilian cohort: P = 0.75; Portuguese cohort: P = 0.97). Nonetheless, the genetic ancestry contribution of the Brazilian and Portuguese population were different, and a greater European and Amerindian ancestry contribution was detected in the Portuguese population while a higher African genetic ancestry contribution was observed in Brazilian population of both NASH and S. Steatosis groups.

conclusionThere was no difference between the genetic ancestry contribution among Brazilian and Portuguese individuals with NASH and S. Steatosis from each cohort.

Indexed as

Admixed populationAncestryNonalcoholic fatty liver diseaseNonalcoholic steatohepatitisSimple steatosis

Identifiers

PMID26052389
PMCPMC4450207
OpenAlexW2396894178

What OpenQuestion holds

Textmetadata
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.