ArticleFrontiers in microbiology2015
Genome wide transcriptional profiling of Herbaspirillum seropedicae SmR1 grown in the presence of naringenin.
Article in Frontiers in microbiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.
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Who cites it
14 citing papers in PubMed, 21 citations in OpenAlex.
- Multimodal Inhibition ofJournal of agricultural and food chemistry · 2025Article
- Flavonoids influence key rhizocompetence traits for early root colonization and PCB degradation potential ofFrontiers in plant science · 2024Article
- Dual RNA-seq of maize andFrontiers in plant science · 2024Article
- Flavonoids Are Intra- and Inter-Kingdom Modulator Signals.Microorganisms · 2022Review
- Article
- Insights into the early stages of plant-endophytic bacteria interaction.World journal of microbiology & biotechnology · 2021Review
- Article
- In silico prediction and expression profile analysis of small non-coding RNAs in Herbaspirillum seropedicae SmR1.BMC genomics · 2020Article
- Modulation of defence and iron homeostasis genes in rice roots by the diazotrophic endophyte Herbaspirillum seropedicae.Scientific reports · 2019Article
- Defining the Genetic Basis of Plant⁻Endophytic Bacteria Interactions.International journal of molecular sciences · 2019Review
- Stories of the future: manipulating RNA and Intra/Interkingdom communication.Microbial biotechnology · 2019Article
- Article
- Effects of Inhibitors on the Transcriptional Profiling ofFrontiers in microbiology · 2017Article
- RNA-seq transcriptional profiling of Herbaspirillum seropedicae colonizing wheat (Triticum aestivum) roots.Plant molecular biology · 2016Article
Corrections and comments
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Authors and funding
12 authors at 3 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Herbaspirillum seropedicae is a diazotrophic bacterium which associates endophytically with economically important gramineae. Flavonoids such as naringenin have been shown to have an effect on the interaction between H. seropedicae and its host plants. We used a high-throughput sequencing based method (RNA-Seq) to access the influence of naringenin on the whole transcriptome profile of H. seropedicae. Three hundred and four genes were downregulated and seventy seven were upregulated by naringenin. Data analysis revealed that genes related to bacterial flagella biosynthesis, chemotaxis and biosynthesis of peptidoglycan were repressed by naringenin. Moreover, genes involved in aromatic metabolism and multidrug transport efllux were actived.
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