Evidence map›Paper›PMID 26052271›Full record

ArticleFrontiers in neuroanatomy2015

FIB/SEM technology and high-throughput 3D reconstruction of dendritic spines and synapses in GFP-labeled adult-generated neurons.

Carles Bosch, Albert Martínez, Nuria Masachs, Cátia M Teixeira, Isabel Fernaud, Fausto Ulloa, Esther Pérez-Martínez, Carlos Lois, Joan X Comella, Javier DeFelipe and 2 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Frontiers in neuroanatomy, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
4.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 73 citations in OpenAlex.

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  2. Pathway-Specific Ultrastructure of Thalamocortical Synapses in Mouse Somatosensory Area S2.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2025
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  20. Area-Specific Synapse Structure in Branched Posterior Nucleus Axons Reveals a New Level of Complexity in Thalamocortical Networks.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2020
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 7 institutions in 2 countries.

Carles BoschDevelopmental Neurobiology and Regeneration Unit, Department of Cell Biology and Parc Cientific de Barcelona, University of Barcelona Barcelona, Spain ; Centro de Investigación Biomédica en Red sobre Enfermedades Neurodegenerativas (CIBERNED), Insituto de Salul Carlos III Madrid, Spain ; Institut de Recerca de l'Hospital Universitari de la Vall d'Hebron (VHIR) Barcelona, Spain.
Albert MartínezDevelopmental Neurobiology and Regeneration Unit, Department of Cell Biology and Parc Cientific de Barcelona, University of Barcelona Barcelona, Spain.
Nuria MasachsDevelopmental Neurobiology and Regeneration Unit, Department of Cell Biology and Parc Cientific de Barcelona, University of Barcelona Barcelona, Spain ; Centro de Investigación Biomédica en Red sobre Enfermedades Neurodegenerativas (CIBERNED), Insituto de Salul Carlos III Madrid, Spain.
Cátia M TeixeiraDevelopmental Neurobiology and Regeneration Unit, Department of Cell Biology and Parc Cientific de Barcelona, University of Barcelona Barcelona, Spain ; Centro de Investigación Biomédica en Red sobre Enfermedades Neurodegenerativas (CIBERNED), Insituto de Salul Carlos III Madrid, Spain.
Isabel FernaudCentro de Investigación Biomédica en Red sobre Enfermedades Neurodegenerativas (CIBERNED), Insituto de Salul Carlos III Madrid, Spain ; Laboratorio Cajal de Circuitos Corticales, Centro de Tecnología Biomédica, Universidad Politécnica de Madrid, Campus de Montegancedo Madrid, Spain ; Instituto Cajal (Consejo Superior de Investigaciones Científicas) Madrid, Spain.
Fausto UlloaDevelopmental Neurobiology and Regeneration Unit, Department of Cell Biology and Parc Cientific de Barcelona, University of Barcelona Barcelona, Spain ; Centro de Investigación Biomédica en Red sobre Enfermedades Neurodegenerativas (CIBERNED), Insituto de Salul Carlos III Madrid, Spain.
Esther Pérez-MartínezDevelopmental Neurobiology and Regeneration Unit, Department of Cell Biology and Parc Cientific de Barcelona, University of Barcelona Barcelona, Spain ; Centro de Investigación Biomédica en Red sobre Enfermedades Neurodegenerativas (CIBERNED), Insituto de Salul Carlos III Madrid, Spain.
Carlos LoisDepartment of Neurobiology, University of Massachusetts Medical School Worcester, MA, USA.
Joan X ComellaCentro de Investigación Biomédica en Red sobre Enfermedades Neurodegenerativas (CIBERNED), Insituto de Salul Carlos III Madrid, Spain ; Institut de Recerca de l'Hospital Universitari de la Vall d'Hebron (VHIR) Barcelona, Spain ; Institut de Neurociències, Departament de Bioquímica i Biologia Molecular, Facultat de Medicina, Universitat Autònoma de Barcelona Bellaterra, Spain.
Javier DeFelipeCentro de Investigación Biomédica en Red sobre Enfermedades Neurodegenerativas (CIBERNED), Insituto de Salul Carlos III Madrid, Spain ; Laboratorio Cajal de Circuitos Corticales, Centro de Tecnología Biomédica, Universidad Politécnica de Madrid, Campus de Montegancedo Madrid, Spain ; Instituto Cajal (Consejo Superior de Investigaciones Científicas) Madrid, Spain.
Angel Merchán-PérezCentro de Investigación Biomédica en Red sobre Enfermedades Neurodegenerativas (CIBERNED), Insituto de Salul Carlos III Madrid, Spain ; Laboratorio Cajal de Circuitos Corticales, Centro de Tecnología Biomédica, Universidad Politécnica de Madrid, Campus de Montegancedo Madrid, Spain ; Departamento de Arquitectura y Tecnología de Sistemas Informáticos, Escuela Técnica Superior de Ingenieros Informáticos, Universidad Politécnica de Madrid Madrid, Spain.
Eduardo SorianoDevelopmental Neurobiology and Regeneration Unit, Department of Cell Biology and Parc Cientific de Barcelona, University of Barcelona Barcelona, Spain ; Centro de Investigación Biomédica en Red sobre Enfermedades Neurodegenerativas (CIBERNED), Insituto de Salul Carlos III Madrid, Spain ; Institut de Recerca de l'Hospital Universitari de la Vall d'Hebron (VHIR) Barcelona, Spain ; Institució Catalana de Recerca i Estudis Avançats Academia Barcelona, Spain.
Universitat de Barcelona · ESVall d'Hebron Institut de Recerca · ESCentro de Investigación Biomédica en Red · ESBiomedical Research Networking Center on Neurodegenerative Diseases · ESInstituto de Salud Carlos III · ESUniversidad Politécnica de Madrid · ESUniversity of Massachusetts Chan Medical School · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The fine analysis of synaptic contacts is usually performed using transmission electron microscopy (TEM) and its combination with neuronal labeling techniques. However, the complex 3D architecture of neuronal samples calls for their reconstruction from serial sections. Here we show that focused ion beam/scanning electron microscopy (FIB/SEM) allows efficient, complete, and automatic 3D reconstruction of identified dendrites, including their spines and synapses, from GFP/DAB-labeled neurons, with a resolution comparable to that of TEM. We applied this technology to analyze the synaptogenesis of labeled adult-generated granule cells (GCs) in mice. 3D reconstruction of dendritic spines in GCs aged 3-4 and 8-9 weeks revealed two different stages of dendritic spine development and unexpected features of synapse formation, including vacant and branched dendritic spines and presynaptic terminals establishing synapses with up to 10 dendritic spines. Given the reliability, efficiency, and high resolution of FIB/SEM technology and the wide use of DAB in conventional EM, we consider FIB/SEM fundamental for the detailed characterization of identified synaptic contacts in neurons in a high-throughput manner.

Indexed as

3D-reconstructionadult neurogenesisdendritic spineselectron microscopyFIB/SEMsynapses

Identifiers

PMID26052271
PMCPMC4440362
OpenAlexW1507905035

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.