Evidence map›Paper›PMID 26051890›Full record

ArticleCurrent biology : CB2015

Genomic signatures of cooperation and conflict in the social amoeba.

Elizabeth A Ostrowski, Yufeng Shen, Xiangjun Tian, Richard Sucgang, Huaiyang Jiang, Jiaxin Qu, Mariko Katoh-Kurasawa, Debra A Brock, Christopher Dinh, Fremiet Lara-Garduno and 16 more

Abstract read
In one paragraph

Article in Current biology : CB, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed.

  1. Review
  2. Cooperation and the evolution of bacterial niche breadth.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  3. Hypermutable hotspot enables the rapid evolution of self/non-self recognition genes inProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  4. Article
  5. Article
  6. Article
  7. Reduced social function in experimentally evolvedProceedings. Biological sciences · 2023
    Article
  8. Article
  9. Open questions in the social lives of viruses.Journal of evolutionary biology · 2023
    Review
  10. Article
  11. Article
  12. Kin selection for cooperation in natural bacterial populations.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  13. The evolution of cheating in viruses.Nature communications · 2021
    Review
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

26 authors.

Elizabeth A OstrowskiDepartment of Biology and Biochemistry, University of Houston, Houston, TX 77204, USA. Electronic address: eaostrowski@uh.edu.
Yufeng ShenDepartments of Systems Biology and Biomedical Informatics, Columbia University, New York, NY 10027, USA.
Xiangjun TianAlkek Center for Metagenomics and Microbiome Research, Department of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, TX 77030, USA.
Richard SucgangVerna and Marrs McLean Department of Biochemistry and Molecular Biology, Baylor College of Medicine, Houston, TX 77030, USA.
Huaiyang JiangHuman Genome Sequencing Center, Baylor College of Medicine, Houston, TX 77030, USA.
Jiaxin QuHuman Genome Sequencing Center, Baylor College of Medicine, Houston, TX 77030, USA.
Mariko Katoh-KurasawaDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA.
Debra A BrockDepartment of Biology, Washington University in St. Louis, St. Louis, MO 63130, USA.
Christopher DinhVerna and Marrs McLean Department of Biochemistry and Molecular Biology, Baylor College of Medicine, Houston, TX 77030, USA.
Fremiet Lara-GardunoHuman Genome Sequencing Center, Baylor College of Medicine, Houston, TX 77030, USA.
Sandra L LeeHuman Genome Sequencing Center, Baylor College of Medicine, Houston, TX 77030, USA.
Christie L KovarHuman Genome Sequencing Center, Baylor College of Medicine, Houston, TX 77030, USA.
Huyen H DinhHuman Genome Sequencing Center, Baylor College of Medicine, Houston, TX 77030, USA.
Viktoriya KorchinaHuman Genome Sequencing Center, Baylor College of Medicine, Houston, TX 77030, USA.
LaRonda JacksonHuman Genome Sequencing Center, Baylor College of Medicine, Houston, TX 77030, USA.
Shobha PatilHuman Genome Sequencing Center, Baylor College of Medicine, Houston, TX 77030, USA.
Yi HanHuman Genome Sequencing Center, Baylor College of Medicine, Houston, TX 77030, USA.
Lesley ChaboubHuman Genome Sequencing Center, Baylor College of Medicine, Houston, TX 77030, USA.
Gad ShaulskyDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA.
Donna M MuznyHuman Genome Sequencing Center, Baylor College of Medicine, Houston, TX 77030, USA; Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA.
Kim C WorleyHuman Genome Sequencing Center, Baylor College of Medicine, Houston, TX 77030, USA; Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA.
Richard A GibbsHuman Genome Sequencing Center, Baylor College of Medicine, Houston, TX 77030, USA; Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA.
Stephen RichardsHuman Genome Sequencing Center, Baylor College of Medicine, Houston, TX 77030, USA.
Adam KuspaVerna and Marrs McLean Department of Biochemistry and Molecular Biology, Baylor College of Medicine, Houston, TX 77030, USA.
Joan E StrassmannDepartment of Biology, Washington University in St. Louis, St. Louis, MO 63130, USA.
David C QuellerDepartment of Biology, Washington University in St. Louis, St. Louis, MO 63130, USA.

Funding

PROJECT III - Computational Analysis of Phenotypes andP01HD039691 · NICHD · BAYLOR COLLEGE OF MEDICINE · PI SUCGANG, RICHARD · 2001 to 2016
$14.4M
NICHD NIH HHS P01 HD039691
6 · The paper itself

Abstract

Cooperative systems are susceptible to invasion by selfish individuals that profit from receiving the social benefits but fail to contribute. These so-called "cheaters" can have a fitness advantage in the laboratory, but it is unclear whether cheating provides an important selective advantage in nature. We used a population genomic approach to examine the history of genes involved in cheating behaviors in the social amoeba Dictyostelium discoideum, testing whether these genes experience rapid evolutionary change as a result of conflict over spore-stalk fate. Candidate genes and surrounding regions showed elevated polymorphism, unusual patterns of linkage disequilibrium, and lower levels of population differentiation, but they did not show greater between-species divergence. The signatures were most consistent with frequency-dependent selection acting to maintain multiple alleles, suggesting that conflict may lead to stalemate rather than an escalating arms race. Our results reveal the evolutionary dynamics of cooperation and cheating and underscore how sequence-based approaches can be used to elucidate the history of conflicts that are difficult to observe directly.

Indexed as

Genome, ProtozoanDictyosteliumEvolution, MolecularGenomicsPolymorphism, GeneticSelection, Genetic

Identifiers

PMID26051890
PMCPMC4591038

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.