Evidence map›Paper›PMID 26051374›Full record

ArticleBMC plant biology2015

Parallel subfunctionalisation of PsbO protein isoforms in angiosperms revealed by phylogenetic analysis and mapping of sequence variability onto protein structure.

Miloš Duchoslav, Lukáš Fischer

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Article in BMC plant biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

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5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Miloš DuchoslavDepartment of Experimental Plant Biology, Faculty of Science, Charles University in Prague, Viničná 5,, 128 44 Praha 2, Czech Republic. duchmil@gmail.com.
Lukáš FischerDepartment of Experimental Plant Biology, Faculty of Science, Charles University in Prague, Viničná 5,, 128 44 Praha 2, Czech Republic. lukasf@natur.cuni.cz.
Charles University · CZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundPsbO, the manganese-stabilising protein, is an indispensable extrinsic subunit of photosystem II. It plays a crucial role in the stabilisation of the water-splitting Mn4CaO5 cluster, which catalyses the oxidation of water to molecular oxygen by using light energy. PsbO was also demonstrated to have a weak GTPase activity that could be involved in regulation of D1 protein turnover. Our analysis of psbO sequences showed that many angiosperm species express two psbO paralogs, but the pairs of isoforms in one species were not orthologous to pairs of isoforms in distant species.

resultsPhylogenetic analysis of 91 psbO sequences from 49 land plant species revealed that psbO duplication occurred many times independently, generally at the roots of modern angiosperm families. In spite of this, the level of isoform divergence was similar in different species. Moreover, mapping of the differences on the protein tertiary structure showed that the isoforms in individual species differ from each other on similar positions, mostly on the luminally exposed end of the β-barrel structure. Comparison of these differences with the location of differences between PsbOs from diverse angiosperm families indicated various selection pressures in PsbO evolution and potential interaction surfaces on the PsbO structure.

conclusionsThe analyses suggest that similar subfunctionalisation of PsbO isoforms occurred parallelly in various lineages. We speculate that the presence of two PsbO isoforms helps the plants to finely adjust the photosynthetic apparatus in response to variable conditions. This might be mediated by diverse GTPase activity, since the isoform differences predominate near the predicted GTP-binding site.

Indexed as

PhylogenyAmino AcidsAmino Acid SequenceAmino Acid SubstitutionGenes, PlantMagnoliopsidaModels, MolecularOpen Reading FramesPhotosystem II Protein ComplexProtein IsoformsProtein Structure, SecondaryProtein Structure, TertiarySpecies SpecificityAmino Acidsphotosystem II manganese-stabilizing proteinPhotosystem II Protein ComplexProtein Isoforms

Identifiers

PMID26051374
PMCPMC4459440
OpenAlexW1517571627

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.