Evidence map›Paper›PMID 26051248›Full record

ArticleJournal of the American Chemical Society2015

A fluorogenic aryl fluorosulfate for intraorganellar transthyretin imaging in living cells and in Caenorhabditis elegans.

Aleksandra Baranczak, Yu Liu, Stephen Connelly, Wen-Ge Han Du, Erin R Greiner, Joseph C Genereux, R Luke Wiseman, Yvonne S Eisele, Nadine C Bradbury, Jiajia Dong and 5 more

Abstract read
In one paragraph

Article in Journal of the American Chemical Society, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
5.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 102 citations in OpenAlex.

  1. A Multifunctional Sulfur(VI) Fluoride for SuFEx Reactions: N-CFAngewandte Chemie (International ed. in English) · 2026
    Article
  2. Article
  3. Review
  4. Article
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  9. Article
  10. Review
  11. Sulfur fluoride exchange.Nature reviews. Methods primers · 2023
    Article
  12. Article
  13. Article
  14. Identification of simple arylfluorosulfates as potent agents against resistant bacteria.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  15. Sulfur [Journal of the American Chemical Society · 2021
    Article
  16. Review
  17. Article
  18. Review
  19. Article
  20. SuFEx-enabled, agnostic discovery of covalent inhibitors of human neutrophil elastase.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 1 institution in 1 country.

Aleksandra Baranczak†Department of Chemistry, ‡Department of Molecular and Experimental Medicine, §Department of Integrative Structural and Computational Biology, ∥Department of Chemical Physiology, ⊥Department of Molecular and Cellular Neuroscience, #The Skaggs Institute for Chemical Biology, ∇Dorris Neuroscience Center, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, United States.
Yu Liu†Department of Chemistry, ‡Department of Molecular and Experimental Medicine, §Department of Integrative Structural and Computational Biology, ∥Department of Chemical Physiology, ⊥Department of Molecular and Cellular Neuroscience, #The Skaggs Institute for Chemical Biology, ∇Dorris Neuroscience Center, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, United States.
Stephen Connelly†Department of Chemistry, ‡Department of Molecular and Experimental Medicine, §Department of Integrative Structural and Computational Biology, ∥Department of Chemical Physiology, ⊥Department of Molecular and Cellular Neuroscience, #The Skaggs Institute for Chemical Biology, ∇Dorris Neuroscience Center, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, United States.
Wen-Ge Han Du†Department of Chemistry, ‡Department of Molecular and Experimental Medicine, §Department of Integrative Structural and Computational Biology, ∥Department of Chemical Physiology, ⊥Department of Molecular and Cellular Neuroscience, #The Skaggs Institute for Chemical Biology, ∇Dorris Neuroscience Center, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, United States.
Erin R Greiner†Department of Chemistry, ‡Department of Molecular and Experimental Medicine, §Department of Integrative Structural and Computational Biology, ∥Department of Chemical Physiology, ⊥Department of Molecular and Cellular Neuroscience, #The Skaggs Institute for Chemical Biology, ∇Dorris Neuroscience Center, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, United States.
Joseph C Genereux†Department of Chemistry, ‡Department of Molecular and Experimental Medicine, §Department of Integrative Structural and Computational Biology, ∥Department of Chemical Physiology, ⊥Department of Molecular and Cellular Neuroscience, #The Skaggs Institute for Chemical Biology, ∇Dorris Neuroscience Center, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, United States.
R Luke Wiseman†Department of Chemistry, ‡Department of Molecular and Experimental Medicine, §Department of Integrative Structural and Computational Biology, ∥Department of Chemical Physiology, ⊥Department of Molecular and Cellular Neuroscience, #The Skaggs Institute for Chemical Biology, ∇Dorris Neuroscience Center, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, United States.
Yvonne S Eisele†Department of Chemistry, ‡Department of Molecular and Experimental Medicine, §Department of Integrative Structural and Computational Biology, ∥Department of Chemical Physiology, ⊥Department of Molecular and Cellular Neuroscience, #The Skaggs Institute for Chemical Biology, ∇Dorris Neuroscience Center, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, United States.
Nadine C Bradbury†Department of Chemistry, ‡Department of Molecular and Experimental Medicine, §Department of Integrative Structural and Computational Biology, ∥Department of Chemical Physiology, ⊥Department of Molecular and Cellular Neuroscience, #The Skaggs Institute for Chemical Biology, ∇Dorris Neuroscience Center, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, United States.
Jiajia Dong†Department of Chemistry, ‡Department of Molecular and Experimental Medicine, §Department of Integrative Structural and Computational Biology, ∥Department of Chemical Physiology, ⊥Department of Molecular and Cellular Neuroscience, #The Skaggs Institute for Chemical Biology, ∇Dorris Neuroscience Center, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, United States.
Louis Noodleman†Department of Chemistry, ‡Department of Molecular and Experimental Medicine, §Department of Integrative Structural and Computational Biology, ∥Department of Chemical Physiology, ⊥Department of Molecular and Cellular Neuroscience, #The Skaggs Institute for Chemical Biology, ∇Dorris Neuroscience Center, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, United States.
K Barry Sharpless†Department of Chemistry, ‡Department of Molecular and Experimental Medicine, §Department of Integrative Structural and Computational Biology, ∥Department of Chemical Physiology, ⊥Department of Molecular and Cellular Neuroscience, #The Skaggs Institute for Chemical Biology, ∇Dorris Neuroscience Center, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, United States.
Ian A Wilson†Department of Chemistry, ‡Department of Molecular and Experimental Medicine, §Department of Integrative Structural and Computational Biology, ∥Department of Chemical Physiology, ⊥Department of Molecular and Cellular Neuroscience, #The Skaggs Institute for Chemical Biology, ∇Dorris Neuroscience Center, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, United States.
Sandra E Encalada†Department of Chemistry, ‡Department of Molecular and Experimental Medicine, §Department of Integrative Structural and Computational Biology, ∥Department of Chemical Physiology, ⊥Department of Molecular and Cellular Neuroscience, #The Skaggs Institute for Chemical Biology, ∇Dorris Neuroscience Center, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, United States.
Jeffery W Kelly†Department of Chemistry, ‡Department of Molecular and Experimental Medicine, §Department of Integrative Structural and Computational Biology, ∥Department of Chemical Physiology, ⊥Department of Molecular and Cellular Neuroscience, #The Skaggs Institute for Chemical Biology, ∇Dorris Neuroscience Center, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, United States.
Scripps Research Institute · US

Funding

ZWITTERION SURFACTANT DDMAB FOR IMPROV STABIL OF PROTEINP41RR001209 · NCRR · STANFORD UNIVERSITY · PI SCOTT, EMILY E · 1985 to 2011
$38.9M
X-ray Absorption Spectroscopy (XAS) pp.711-759P41GM103393 · NIGMS · STANFORD UNIVERSITY · PI HODGSON, KEITH O · 2012 to 2019
$30.6M
Probing the Biochemical Mechanisms of Amyloid DiseaseR01DK046335 · NIDDK · SCRIPPS RESEARCH INSTITUTE, THE · PI KELLY, JEFFERY W · 1998 to 2025
$8.8M
Probing the biochemical mechanism of amyloid diseaseR37DK046335 · NIDDK · SCRIPPS RESEARCH INSTITUTE, THE · PI KELLY, JEFFERY W · 2006 to 2015
$5.9M
Structural Basis of T Cell Receptor RecognitionR37AI042266 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI WILSON, IAN A · 2003 to 2012
$5.8M
Understanding and Ameliorating Loss-of-Function Protein Misfolding DiseasesR01DK075295 · NIDDK · SCRIPPS RESEARCH INSTITUTE, THE · PI KELLY, JEFFERY W · 2006 to 2014
$3.9M
Structural basis of TLR and NLR recognition and signalingR01AI042266 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI WILSON, IAN A · 1998 to 2017
$3.7M
Quantum Chemistry of Proton Pumping by Cytochrome c OxidasesR01GM100934 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI NOODLEMAN, LOUIS · 2012 to 2020
$3.1M
Proteostasis Network Factors Involved in Apolipoprotein B Folding and SecretionF32HL099245 · NHLBI · SCRIPPS RESEARCH INSTITUTE, THE · PI GENEREUX, JOSEPH · 2010 to 2012
$146k
BIOCHEMICAL MECHANISM OF AMYLOID DISEASER29DK046335 · NIDDK · TEXAS A&M UNIVERSITY SYSTEM · PI KELLY, JEFFERY W · 1993 to 1997
–
NCRR NIH HHS P41 RR001209NCRR NIH HHS P41RR001209NHLBI NIH HHS F32 HL099245NHLBI NIH HHS F32-HL099245NIAID NIH HHS AI42266NIAID NIH HHS R01 AI042266NIAID NIH HHS R37 AI042266NIDDK NIH HHS DK046335NIDDK NIH HHS DK075295NIDDK NIH HHS R01 DK046335NIDDK NIH HHS R01 DK075295NIDDK NIH HHS R37 DK046335NIGMS NIH HHS GM100934NIGMS NIH HHS P41 GM103393NIGMS NIH HHS P41GM103393NIGMS NIH HHS R01 GM100934
6 · The paper itself

Abstract

Fluorogenic probes, due to their often greater spatial and temporal sensitivity in comparison to permanently fluorescent small molecules, represent powerful tools to study protein localization and function in the context of living systems. Herein, we report fluorogenic probe 4, a 1,3,4-oxadiazole designed to bind selectively to transthyretin (TTR). Probe 4 comprises a fluorosulfate group not previously used in an environment-sensitive fluorophore. The fluorosulfate functional group does not react covalently with TTR on the time scale required for cellular imaging, but does red shift the emission maximum of probe 4 in comparison to its nonfluorosulfated analogue. We demonstrate that probe 4 is dark in aqueous buffers, whereas the TTR·4 complex exhibits a fluorescence emission maximum at 481 nm. The addition of probe 4 to living HEK293T cells allows efficient binding to and imaging of exogenous TTR within intracellular organelles, including the mitochondria and the endoplasmic reticulum. Furthermore, live Caenorhabditis elegans expressing human TTR transgenically and treated with probe 4 display TTR·4 fluorescence in macrophage-like coelomocytes. An analogue of fluorosulfate probe 4 does react selectively with TTR without labeling the remainder of the cellular proteome. Studies on this analogue suggest that certain aryl fluorosulfates, due to their cell and organelle permeability and activatable reactivity, could be considered for the development of protein-selective covalent probes.

Indexed as

AnimalsCaenorhabditis elegansCells, CulturedCell SurvivalFluorescent DyesFluoridesHEK293 CellsHumansModels, MolecularMolecular StructureOrganellesPrealbuminSulfuric AcidsFluorescent DyesFluoridesfluorosulfonic acidPrealbuminSulfuric Acids

Identifiers

PMID26051248
PMCPMC4472559
OpenAlexW2292412835

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.