Evidence map›Paper›PMID 26049098›Full record

ArticleAnalytical biochemistry2015

The development of mitochondrial membrane affinity chromatography columns for the study of mitochondrial transmembrane proteins.

K-L Habicht, N S Singh, F E Indig, I W Wainer, R Moaddel, R Shimmo

Open access · greenAbstract read
In one paragraph

Article in Analytical biochemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 10 citations in OpenAlex.

  1. Review
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  3. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

K-L HabichtDepartment of Natural Sciences, Institute of Mathematics and Natural Sciences, Tallinn University, 10120 Tallinn, Estonia; Biomedical Research Center, National Institute on Aging, National Institutes of Health, Baltimore, MD 21224, USA.
N S SinghBiomedical Research Center, National Institute on Aging, National Institutes of Health, Baltimore, MD 21224, USA.
F E IndigBiomedical Research Center, National Institute on Aging, National Institutes of Health, Baltimore, MD 21224, USA.
I W WainerBiomedical Research Center, National Institute on Aging, National Institutes of Health, Baltimore, MD 21224, USA.
R MoaddelBiomedical Research Center, National Institute on Aging, National Institutes of Health, Baltimore, MD 21224, USA.
R ShimmoDepartment of Natural Sciences, Institute of Mathematics and Natural Sciences, Tallinn University, 10120 Tallinn, Estonia. Electronic address: ruth.shimmo@tlu.ee.
National Institute on Aging · USNational Institutes of Health · US

Funding

NIA/RRB Confocal Imaging FacilityZICAG000615 · NIA · NATIONAL INSTITUTE ON AGING · PI INDIG, FRED · 2009 to 2025
$17.9M
Immobilized Receptors In Drug DiscoveryZIAAG000295 · NIA · NATIONAL INSTITUTE ON AGING · PI EGAN, JOSEPHINE · 2009 to 2025
$11.4M
Intramural NIH HHS Z99 AG999999Intramural NIH HHS ZIA AG000295
6 · The paper itself

Abstract

Mitochondrial membrane fragments from U-87 MG (U87MG) and HEK-293 cells were successfully immobilized onto immobilized artificial membrane (IAM) chromatographic support and surface of activated open tubular (OT) silica capillary, resulting in mitochondrial membrane affinity chromatography (MMAC) columns. Translocator protein (TSPO), located in mitochondrial outer membrane as well as sulfonylurea and mitochondrial permeability transition pore (mPTP) receptors, localized to the inner membrane, were characterized. Frontal displacement experiments with multiple concentrations of dipyridamole (DIPY) and PK-11195 were run on MMAC (U87MG) column, and the binding affinities (Kd) determined were 1.08±0.49 and 0.0086±0.0006μM, respectively, consistent with previously reported values. Furthermore, binding affinities (Ki) for DIPY binding site were determined for TSPO ligands, PK-11195, mesoporphyrin IX, protoporphyrin IX, and rotenone. In addition, the relative ranking of these TSPO ligands based on single displacement studies using DIPY as marker on MMAC (U87MG) was consistent with the obtained Ki values. The immobilization of mitochondrial membrane fragments was also confirmed by confocal microscopy.

Indexed as

Binding SitesChromatography, AffinityHEK293 CellsHumansLigandsMembrane ProteinsMembranes, ArtificialMicroscopy, ConfocalMitochondrial MembranesLigandsMembrane ProteinsMembranes, ArtificialMitochondrial membrane affinity chromatographyTranslocator protein

Identifiers

PMID26049098
PMCPMC4512758
OpenAlexW619329819

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.