Evidence map›Paper›PMID 26048971›Full record

ArticleThe Journal of infectious diseases2015

Parallel Epidemics of Community-Associated Methicillin-Resistant Staphylococcus aureus USA300 Infection in North and South America.

Paul J Planet, Lorena Diaz, Sergios-Orestis Kolokotronis, Apurva Narechania, Jinnethe Reyes, Galen Xing, Sandra Rincon, Hannah Smith, Diana Panesso, Chanelle Ryan and 10 more

Abstract read
In one paragraph

Article in The Journal of infectious diseases, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 78 papers.

0numbers the graph read from it
0cells of the map it votes in
78citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

78 citing papers in PubMed.

  1. Trial
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  10. Methicillin-resistantFrontiers in microbiology · 2025
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  15. Evolution of polyamine resistance inbioRxiv : the preprint server for biology · 2024
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  16. Community-acquired methicillin-resistantFrontiers in medicine · 2024
    Article
  17. Review
  18. Molecular Epidemiologic and Geo-Spatial Characterization ofAntibiotics (Basel, Switzerland) · 2023
    Article
  19. Article
  20. Article

18 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors.

Paul J PlanetDivision of Pediatric Infectious Diseases, Department of Pediatrics, Columbia University, College of Physicians and Surgeons Sackler Institute for Comparative Genomics, American Museum of Natural History.
Lorena DiazMolecular Genetics and Antimicrobial Resistance Unit, International Center for Microbial Genomics, Universidad El Bosque, Bogotá, Colombia.
Sergios-Orestis KolokotronisSackler Institute for Comparative Genomics, American Museum of Natural History Department of Biological Sciences, Fordham University, Bronx, New York.
Apurva NarechaniaSackler Institute for Comparative Genomics, American Museum of Natural History.
Jinnethe ReyesMolecular Genetics and Antimicrobial Resistance Unit, International Center for Microbial Genomics, Universidad El Bosque, Bogotá, Colombia.
Galen XingDivision of Pediatric Infectious Diseases, Department of Pediatrics, Columbia University, College of Physicians and Surgeons.
Sandra RinconMolecular Genetics and Antimicrobial Resistance Unit, International Center for Microbial Genomics, Universidad El Bosque, Bogotá, Colombia.
Hannah SmithDivision of Pediatric Infectious Diseases, Department of Pediatrics, Columbia University, College of Physicians and Surgeons.
Diana PanessoDivision of Infectious Diseases, Department of Internal Medicine Molecular Genetics and Antimicrobial Resistance Unit, International Center for Microbial Genomics, Universidad El Bosque, Bogotá, Colombia.
Chanelle RyanDivision of Pediatric Infectious Diseases, Department of Pediatrics, Columbia University, College of Physicians and Surgeons.
Dylan P SmithMolecular Genetics and Antimicrobial Resistance Unit, International Center for Microbial Genomics, Universidad El Bosque, Bogotá, Colombia.
Manuel GuzmanCentro Médico Caracas, Venezuela.
Jeannete ZuritaHospital Vozandes, Pontificia Universidad Catolica, Quito, Ecuador.
Robert SebraGenome Center, Mount Sinai Hospital, New York City.
Gintaras DeikusGenome Center, Mount Sinai Hospital, New York City.
Rathel L NolanDivision of Infectious Diseases, Department of Internal Medicine.
Fred C TenoverCepheid, Sunnyvale, California.
George M WeinstockThe Jackson Laboratory for Genomic Medicine, Farmington, Connecticut.
D Ashley RobinsonDivision of Infectious Diseases, Department of Microbiology, University of Mississippi Medical Center, Jackson.
Cesar A AriasDivision of Infectious Diseases, Department of Internal Medicine Department of Microbiology and Molecular Genetics, University of Texas Medical School at Houston Molecular Genetics and Antimicrobial Resistance Unit, International Center for Microbial Genomics, Universidad El Bosque, Bogotá, Colombia.

Funding

Molecular Mechanisms Of Daptomycin Resistance In EnterococciR01AI093749 · NIAID · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI ARIAS, CESAR AUGUSTO · 2011 to 2015
$1.9M
Population Genomics of StaphylococciR01GM080602 · NIGMS · UNIVERSITY OF MISSISSIPPI MED CTR · PI ROBINSON, DAVID ASHLEY · 2007 to 2016
$1.8M
Role of Staphylococcus aureus SpA in Microbial Competition and Host ColonizationK08AI101005 · NIAID · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI PLANET, PAUL J · 2012 to 2014
$405k
NIAID NIH HHS K08 AI101005NIAID NIH HHS K08AI101005NIAID NIH HHS R01 AI093749NIGMS NIH HHS R01 GM080602
6 · The paper itself

Abstract

backgroundThe community-associated methicillin-resistant Staphylococcus aureus (CA-MRSA) epidemic in the United States is attributed to the spread of the USA300 clone. An epidemic of CA-MRSA closely related to USA300 has occurred in northern South America (USA300 Latin-American variant, USA300-LV). Using phylogenomic analysis, we aimed to understand the relationships between these 2 epidemics.

methodsWe sequenced the genomes of 51 MRSA clinical isolates collected between 1999 and 2012 from the United States, Colombia, Venezuela, and Ecuador. Phylogenetic analysis was used to infer the relationships and times since the divergence of the major clades.

resultsPhylogenetic analyses revealed 2 dominant clades that segregated by geographical region, had a putative common ancestor in 1975, and originated in 1989, in North America, and in 1985, in South America. Emergence of these parallel epidemics coincides with the independent acquisition of the arginine catabolic mobile element (ACME) in North American isolates and a novel copper and mercury resistance (COMER) mobile element in South American isolates.

conclusionsOur results reveal the existence of 2 parallel USA300 epidemics that shared a recent common ancestor. The simultaneous rapid dissemination of these 2 epidemic clades suggests the presence of shared, potentially convergent adaptations that enhance fitness and ability to spread.

Indexed as

EpidemicsCommunity-Acquired InfectionsEpidemiological MonitoringGenome, BacterialGenotypeHumansMethicillin-Resistant Staphylococcus aureusMolecular EpidemiologyMolecular TypingNorth AmericaPhylogeographySequence Analysis, DNASouth AmericaStaphylococcal InfectionsepidemicsMRSAUSA300USA300-LV

Identifiers

PMID26048971
PMCPMC4655856

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.