Evidence map›Paper›PMID 26048959›Full record

ArticleNucleic acids research2015

The RAD52-like protein ODB1 is required for the efficient excision of two mitochondrial introns spliced via first-step hydrolysis.

José M Gualberto, Monique Le Ret, Barbara Beator, Kristina Kühn

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 34 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

José M GualbertoInstitut de Biologie Moléculaire des Plantes-CNRS-UPR2357, Université de Strasbourg, Strasbourg, France jose.gualberto@ibmp-cnrs.unistra.fr.
Monique Le RetInstitut de Biologie Moléculaire des Plantes-CNRS-UPR2357, Université de Strasbourg, Strasbourg, France.
Barbara BeatorMolekulare Zellbiologie der Pflanzen, Institut für Biologie, Humboldt-Universität zu Berlin, 10115 Berlin, Germany.
Kristina KühnMolekulare Zellbiologie der Pflanzen, Institut für Biologie, Humboldt-Universität zu Berlin, 10115 Berlin, Germany kristina.kuehn@hu-berlin.de.
Humboldt-Universität zu Berlin · DEUniversité de Strasbourg · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Transcript splicing in plant mitochondria involves numerous nucleus-encoded factors, most of which are of eukaryotic origin. Some of these belong to protein families initially characterised to perform unrelated functions. The RAD52-like ODB1 protein has been reported to have roles in homologous recombination-dependent DNA repair in the nuclear and mitochondrial compartments in Arabidopsis thaliana. We show that it is additionally involved in splicing and facilitates the excision of two cis-spliced group II introns, nad1 intron 2 and nad2 intron 1, in Arabidopsis mitochondria. odb1 mutants lacking detectable amounts of ODB1 protein over-accumulated incompletely spliced nad1 and nad2 transcripts. The two ODB1-dependent introns were both found to splice via first-step hydrolysis and to be released as linear or circular molecules instead of lariats. Our systematic analysis of the structures of excised introns in Arabidopsis mitochondria revealed several other hydrolytically spliced group II introns in addition to nad1 intron 2 and nad2 intron 1, indicating that ODB1 is not a general determinant of the hydrolytic splicing pathway.

Indexed as

IntronsRNA SplicingArabidopsis ProteinsDNA-Binding ProteinsHydrolysisMitochondriaMitochondrial ProteinsMutationNADH DehydrogenaseRNARNA, MessengerRNA, MitochondrialRNA PrecursorsArabidopsis ProteinsDNA-Binding ProteinsMitochondrial ProteinsNad1 protein, ArabidopsisNADH DehydrogenaseODB1 protein, ArabidopsisRNARNA, MessengerRNA, MitochondrialRNA Precursors

Identifiers

PMID26048959
PMCPMC4513849
OpenAlexW1855015461

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.