Evidence map›Paper›PMID 26048246›Full record

ArticleGenome research2015

The sea lamprey meiotic map improves resolution of ancient vertebrate genome duplications.

Jeramiah J Smith, Melissa C Keinath

Abstract readComparative Study
In one paragraph

Article in Genome research, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 72 papers.

0numbers the graph read from it
0cells of the map it votes in
72citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

72 citing papers in PubMed.

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  8. Evolution of TOP1 and TOP1MT Topoisomerases in Chordata.Journal of molecular evolution · 2023
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  9. Three amphioxus reference genomes reveal gene and chromosome evolution of chordates.Proceedings of the National Academy of Sciences of the United States of America · 2023
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  10. ThreeFrontiers in cell and developmental biology · 2023
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  11. Article
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  14. Evolutionary History of TOPIIA Topoisomerases in Animals.Journal of molecular evolution · 2022
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  20. A nomenclature for echinoderm genes.Database : the journal of biological databases and curation · 2021
    Article

12 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Jeramiah J SmithDepartment of Biology, University of Kentucky, Lexington, Kentucky 40506, USA.
Melissa C KeinathDepartment of Biology, University of Kentucky, Lexington, Kentucky 40506, USA.

Funding

Functional analysis of programmed genome rearrangementR01GM104123 · NIGMS · UNIVERSITY OF KENTUCKY · PI SMITH, JERAMIAH JAMES · 2013 to 2017
$1.4M
NIGMS NIH HHS R01 GM104123NIGMS NIH HHS R01GM104123
6 · The paper itself

Abstract

It is generally accepted that many genes present in vertebrate genomes owe their origin to two whole-genome duplications that occurred deep in the ancestry of the vertebrate lineage. However, details regarding the timing and outcome of these duplications are not well resolved. We present high-density meiotic and comparative genomic maps for the sea lamprey (Petromyzon marinus), a representative of an ancient lineage that diverged from all other vertebrates ∼550 million years ago. Linkage analyses yielded a total of 95 linkage groups, similar to the estimated number of germline chromosomes (1n ∼ 99), spanning a total of 5570.25 cM. Comparative mapping data yield strong support for the hypothesis that a single whole-genome duplication occurred in the basal vertebrate lineage, but do not strongly support a hypothetical second event. Rather, these comparative maps reveal several evolutionarily independent segmental duplications occurring over the last 600+ million years of chordate evolution. This refined history of vertebrate genome duplication should permit more precise investigations of vertebrate evolution.

Indexed as

Gene DuplicationGenomeAnimalsChromosome MappingChromosomesEvolution, MolecularHumansMeiosisPetromyzonPhylogenySyntenyVertebrates

Identifiers

PMID26048246
PMCPMC4509993

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.