Evidence map›Paper›PMID 26047846›Full record

ArticleGenome biology and evolution2015

Comparison of the Venom Peptides and Their Expression in Closely Related Conus Species: Insights into Adaptive Post-speciation Evolution of Conus Exogenomes.

Neda Barghi, Gisela P Concepcion, Baldomero M Olivera, Arturo O Lluisma

Abstract readComparative Study
In one paragraph

Article in Genome biology and evolution, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

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3 · Its place in the literature

Who cites it

29 citing papers in PubMed.

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  14. Review
  15. Article
  16. Article
  17. Venomics-Accelerated Cone Snail Venom Peptide Discovery.International journal of molecular sciences · 2018
    Review
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Neda BarghiMarine Science Institute, University of the Philippines-Diliman, Quezon City, Philippines.
Gisela P ConcepcionMarine Science Institute, University of the Philippines-Diliman, Quezon City, Philippines Philippine Genome Center, University of the Philippines, Quezon City, Philippines.
Baldomero M OliveraDepartment of Biology, University of Utah.
Arturo O LluismaMarine Science Institute, University of the Philippines-Diliman, Quezon City, Philippines Philippine Genome Center, University of the Philippines, Quezon City, Philippines aolluisma@upd.edu.ph.

Funding

Diverse Drug Lead Compounds from Bacterial Symbionts in Philippine MollusksU19TW008163 · FIC · UNIVERSITY OF UTAH · PI HAYGOOD, MARGO GENEVIEVE · 2014 to 2018
$5.2M
Diverse drug lead compounds from bacterial symbionts in tropical marine mollusksU01TW008163 · FIC · OREGON HEALTH & SCIENCE UNIVERSITY · PI HAYGOOD, MARGO GENEVIEVE · 2008 to 2013
$4.3M
FIC NIH HHS 1U01TW008163FIC NIH HHS U01 TW008163FIC NIH HHS U19 TW008163
6 · The paper itself

Abstract

Genes that encode products with exogenous targets, which comprise an organism's "exogenome," typically exhibit high rates of evolution. The genes encoding the venom peptides (conotoxins or conopeptides) in Conus sensu lato exemplify this class of genes. Their rapid diversification has been established and is believed to be linked to the high speciation rate in this genus. However, the molecular mechanisms that underlie venom peptide diversification and ultimately emergence of new species remain poorly understood. In this study, the sequences and expression levels of conotoxins from several specimens of two closely related worm-hunting species, Conus tribblei and Conus lenavati, were compared through transcriptome analysis. Majority of the identified putative conopeptides were novel, and their diversity, even in each specimen, was remarkably high suggesting a wide range of prey targets for these species. Comparison of the interspecific expression patterns of conopeptides at the superfamily level resulted in the discovery of both conserved as well as species-specific expression patterns, indicating divergence in the regulatory network affecting conotoxin gene expression. Comparison of the transcriptomes of the individual snails revealed that each specimen produces a distinct set of highly expressed conopeptides, reflecting the capability of individual snails to fine-tune the composition of their venoms. These observations reflect the role of sequence divergence and divergence in the control of expression for specific conopeptides in the evolution of the exogenome and hence venom composition in Conus.

Indexed as

Evolution, MolecularAnimalsConotoxinsConus SnailFemaleGenetic VariationGenomeMaleMolecular Sequence DataPeptidesPhylogenyTranscriptomeConotoxinsPeptidesconopeptideconotoxindiversificationspecies-specific expression pattern

Identifiers

PMID26047846
PMCPMC4494072

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.