ArticlePloS one2015
The Plastid Genome of the Cryptomonad Teleaulax amphioxeia.
Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.
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Who cites it
19 citing papers in PubMed, 37 citations in OpenAlex.
- Global metagenomics reveals plastid diversity and unexplored algal lineages.Nature communications · 2026Article
- In a sea of microbes, eddy events trigger diatom export in the Sargasso Sea.ISME communications · 2025Article
- A New Model and Dating for the Evolution of Complex Plastids of Red Alga Origin.Genome biology and evolution · 2024Article
- Encyclopedia of Family A DNA Polymerases Localized in Organelles: Evolutionary Contribution of Bacteria Including the Proto-Mitochondrion.Molecular biology and evolution · 2024Article
- cPlot: Contig-Plotting Visualization for the Analysis of Short-Read Nucleotide Sequence Alignments.International journal of molecular sciences · 2022Article
- Review
- What Happened before Losses of Photosynthesis in Cryptophyte Algae?Molecular biology and evolution · 2022Article
- Comparative Plastid Genomics of Cryptomonas Species Reveals Fine-Scale Genomic Responses to Loss of Photosynthesis.Genome biology and evolution · 2020Article
- The Potential of Cryptophyte Algae in Biomedical and Pharmaceutical Applications.Frontiers in pharmacology · 2020Review
- Genes functioned in kleptoplastids of Dinophysis are derived from haptophytes rather than from cryptophytes.Scientific reports · 2019Article
- Diversification of light capture ability was accompanied by the evolution of phycobiliproteins in cryptophyte algae.Proceedings. Biological sciences · 2019Article
- Evolution of light-independent protochlorophyllide oxidoreductase.Protoplasma · 2019Review
- Plastid Genomes from Diverse Glaucophyte Genera Reveal a Largely Conserved Gene Content and Limited Architectural Diversity.Genome biology and evolution · 2019Article
- Comparative mitochondrial genomics of cryptophyte algae: gene shuffling and dynamic mobile genetic elements.BMC genomics · 2018Article
- Kingdom Chromista and its eight phyla: a new synthesis emphasising periplastid protein targeting, cytoskeletal and periplastid evolution, and ancient divergences.Protoplasma · 2018Article
- Evolutionary Dynamics of Cryptophyte Plastid Genomes.Genome biology and evolution · 2017Article
- The plastid genome of some eustigmatophyte algae harbours a bacteria-derived six-gene cluster for biosynthesis of a novel secondary metabolite.Open biology · 2016Article
- Plastid genome sequences of Gymnochlora stellata, Lotharella vacuolata, and Partenskyella glossopodia reveal remarkable structural conservation among chlorarachniophyte species.Journal of plant research · 2016Article
- Comparative genomics of mitochondria in chlorarachniophyte algae: endosymbiotic gene transfer and organellar genome dynamics.Scientific reports · 2016Article
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Authors and funding
6 authors at 4 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Teleaulax amphioxeia is a photosynthetic unicellular cryptophyte alga that is distributed throughout marine habitats worldwide. This alga is an important plastid donor to the dinoflagellate Dinophysis caudata through the ciliate Mesodinium rubrum in the marine food web. To better understand the genomic characteristics of T. amphioxeia, we have sequenced and analyzed its plastid genome. The plastid genome sequence of T. amphioxeia is similar to that of Rhodomonas salina, and they share significant synteny. This sequence exhibits less similarity to that of Guillardia theta, the representative plastid genome of photosynthetic cryptophytes. The gene content and order of the three photosynthetic cryptomonad plastid genomes studied is highly conserved. The plastid genome of T. amphioxeia is composed of 129,772 bp and includes 143 protein-coding genes, 2 rRNA operons and 30 tRNA sequences. The DNA polymerase III gene (dnaX) was most likely acquired via lateral gene transfer (LGT) from a firmicute bacterium, identical to what occurred in R. salina. On the other hand, the psbN gene was independently encoded by the plastid genome without a reverse transcriptase gene as an intron. To clarify the phylogenetic relationships of the algae with red-algal derived plastids, phylogenetic analyses of 32 taxa were performed, including three previously sequenced cryptophyte plastid genomes containing 93 protein-coding genes. The stramenopiles were found to have branched out from the Chromista taxa (cryptophytes, haptophytes, and stramenopiles), while the cryptophytes and haptophytes were consistently grouped into sister relationships with high resolution.
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