Evidence map›Paper›PMID 26047474›Full record

ArticleScientific reports2015

Large expansion of CTG•CAG repeats is exacerbated by MutSβ in human cells.

Rie Nakatani, Masayuki Nakamori, Harutoshi Fujimura, Hideki Mochizuki, Masanori P Takahashi

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 47 citations in OpenAlex.

  1. Review
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  8. Review
  9. Article
  10. DNA Mismatch Repair and its Role in Huntington's Disease.Journal of Huntington's disease · 2021
    Review
  11. Review
  12. Review
  13. Review
  14. Review
  15. HDAC3 deacetylates the DNA mismatch repair factor MutSβ to stimulate triplet repeat expansions.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  16. Review
  17. Article
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Rie NakataniDepartment of Neurology, Osaka University Graduate School of Medicine.
Masayuki NakamoriDepartment of Neurology, Osaka University Graduate School of Medicine.
Harutoshi FujimuraDepartment of Neurology, Toneyama Hospital, National Hospital Organization.
Hideki MochizukiDepartment of Neurology, Osaka University Graduate School of Medicine.
Masanori P TakahashiDepartment of Neurology, Osaka University Graduate School of Medicine.
Osaka University · JPToneyama National Hospital · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Trinucleotide repeat expansion disorders (TRED) are caused by genomic expansions of trinucleotide repeats, such as CTG and CAG. These expanded repeats are unstable in germline and somatic cells, with potential consequences for disease severity. Previous studies have demonstrated the involvement of DNA repair proteins in repeat instability, although the key factors affecting large repeat expansion and contraction are unclear. Here we investigated these factors in a human cell model harboring 800 CTG•CAG repeats by individually knocking down various DNA repair proteins using short interfering RNA. Knockdown of MSH2 and MSH3, which form the MutSβ heterodimer and function in mismatch repair, suppressed large repeat expansions, whereas knockdown of MSH6, which forms the MutSα heterodimer with MSH2, promoted large expansions exceeding 200 repeats by compensatory increases in MSH3 and the MutSβ complex. Knockdown of topoisomerase 1 (TOP1) and TDP1, which are involved in single-strand break repair, enhanced large repeat contractions. Furthermore, knockdown of senataxin, an RNA/DNA helicase which affects DNA:RNA hybrid formation and transcription-coupled nucleotide excision repair, exacerbated repeat instability in both directions. These results indicate that DNA repair factors, such as MutSβ play important roles in large repeat expansion and contraction, and can be an excellent therapeutic target for TRED.

Indexed as

BrainCell Line, TumorChromatin ImmunoprecipitationDimerizationDNA-Binding ProteinsDNA HelicasesDNA Topoisomerases, Type IGenomic InstabilityHumansMultifunctional EnzymesMutS Homolog 2 ProteinMutS Homolog 3 ProteinMyotonic DystrophyPhosphoric Diester HydrolasesRNA HelicasesRNA InterferenceDNA-Binding ProteinsDNA HelicasesDNA Topoisomerases, Type IG-T mismatch-binding proteinMSH2 protein, humanMSH3 protein, humanMultifunctional EnzymesMutS Homolog 2 ProteinMutS Homolog 3 ProteinPhosphoric Diester HydrolasesRNA HelicasesRNA, Small InterferingSETX protein, humanTDP1 protein, humanTOP1 protein, human

Identifiers

PMID26047474
PMCPMC4457148
OpenAlexW2268710494

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.