Evidence map›Paper›PMID 26047021›Full record

ArticleScientific reports2015

An effective plasma membrane proteomics approach for small tissue samples.

Katrien Smolders, Nathalie Lombaert, Dirk Valkenborg, Geert Baggerman, Lutgarde Arckens

Abstract read
In one paragraph

Article in Scientific reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Katrien SmoldersKU Leuven, Department of Biology, Laboratory of Neuroplasticity and Neuroproteomics, Leuven, Belgium.
Nathalie LombaertKU Leuven, Department of Biology, Laboratory of Neuroplasticity and Neuroproteomics, Leuven, Belgium.
Dirk Valkenborg1] Unit Environmental Risk &Health, VITO, Mol, Belgium [2] Center for Proteomics, UAntwerp, Antwerp, Belgium [3] Interuniversity Institute for Biostatistics and statistical Bioinformatics, Hasselt University, Belgium.
Geert Baggerman1] Unit Environmental Risk &Health, VITO, Mol, Belgium [2] Center for Proteomics, UAntwerp, Antwerp, Belgium.
Lutgarde ArckensKU Leuven, Department of Biology, Laboratory of Neuroplasticity and Neuroproteomics, Leuven, Belgium.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Advancing the quest for new drug targets demands the development of innovative plasma membrane proteome research strategies applicable to small, functionally defined tissue samples. Biotinylation of acute tissue slices and streptavidin pull-down followed by shotgun proteomics allowed the selective extraction and identification of >1,600 proteins of which >60% are associated with the plasma membrane, including (G-protein coupled) receptors, ion channels and transporters, and this from mm(3)-scale tissue.

Indexed as

AnimalsBiotinylationBrainCell MembraneChromatography, AffinityFemaleMaleMembrane ProteinsMice, Inbred C57BLMolecular Sequence AnnotationNerve Tissue ProteinsProteomeProteomicsMembrane ProteinsNerve Tissue ProteinsProteome

Identifiers

PMID26047021
PMCPMC4456939

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.