Evidence map›Paper›PMID 26046990›Full record

ArticlePloS one2015

Integrative Metabolic Signatures for Hepatic Radiation Injury.

Irwin Jack Kurland, Pilib Ó Broin, Aaron Golden, Gang Su, Fan Meng, Laibin Liu, Robert Mohney, Shilpa Kulkarni, Chandan Guha

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 43 citations in OpenAlex.

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  20. Biomarkers of radiation-induced vascular injury.Cancer reports (Hoboken, N.J.) · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Irwin Jack KurlandDepartment of Medicine, Diabetes Center, Stable Isotope and Metabolomics Core Facility, Albert Einstein College of Medicine, Bronx, New York, United States of America.
Pilib Ó BroinDivision of Computational Genetics, Genetics Department, Albert Einstein College of Medicine, Bronx, New York, United States of America.
Aaron GoldenDivision of Computational Genetics, Genetics Department, Albert Einstein College of Medicine, Bronx, New York, United States of America.
Gang SuDepartment of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, Michigan, United States of America.
Fan MengDepartment of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, Michigan, United States of America.
Laibin LiuDepartment of Radiation Oncology, Albert Einstein College of Medicine, Bronx, New York, Unites States of America.
Robert MohneyMetabolon, Durham, North Carolina, United States of America.
Shilpa KulkarniDepartment of Radiation Oncology, Albert Einstein College of Medicine, Bronx, New York, Unites States of America.
Chandan GuhaDepartment of Radiation Oncology, Albert Einstein College of Medicine, Bronx, New York, Unites States of America.
Albert Einstein College of Medicine · USUniversity of Michigan–Ann Arbor · USMetabolon (United States) · US

Funding

Stable Isotope and Metabolomics CoreP60DK020541 · NIDDK · YESHIVA UNIVERSITY · PI FLEISCHER, NORMAN S. · 1986 to 2014
$29.8M
Special Animal CoreP30DK041296 · NIDDK · YESHIVA UNIVERSITY · PI WOLKOFF, ALLAN W · 1989 to 2018
$22.9M
Core-010UL1TR001073 · NCATS · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI KELLER, MARLA J, SHAMOON, HARRY · 2013 to 2017
$21.3M
Stem Cell-Based Therapies for Radiation-Induced Gastrointestinal Sydrome (RIGS)U19AI091175 · NIAID · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI GUHA, CHANDAN · 2010 to 2014
$13.1M
Preparative irradiation for hepatocyte transplantationR01DK064670 · NIDDK · ALBERT EINSTEIN COL OF MED YESHIVA UNIV · PI GUHA, CHANDAN · 2005 to 2009
$1.9M
MR Spectroscopy to Evaluate Liver Repopulation by Transplanted HepatocytesR33CA121051 · NCI · ALBERT EINSTEIN COLLEGE OF MEDICINE · PI GUHA, CHANDAN · 2010 to 2011
$957k
NCATS NIH HHS UL1 TR001073NCI NIH HHS R33 CA121051NIAID NIH HHS 1U19AI091175NIAID NIH HHS U19 AI091175NIDDK NIH HHS P30 DK041296NIDDK NIH HHS P60 DK020541NIDDK NIH HHS P60DK020541NIDDK NIH HHS R01 DK064670
6 · The paper itself

Abstract

backgroundRadiation-induced liver disease (RILD) is a dose-limiting factor in curative radiation therapy (RT) for liver cancers, making early detection of radiation-associated liver injury absolutely essential for medical intervention. A metabolomic approach was used to determine metabolic signatures that could serve as biomarkers for early detection of RILD in mice.

methodsAnesthetized C57BL/6 mice received 0, 10 or 50 Gy Whole Liver Irradiation (WLI) and were contrasted to mice, which received 10 Gy whole body irradiation (WBI). Liver and plasma samples were collected at 24 hours after irradiation. The samples were processed using Gas Chromatography/Mass Spectrometry and Liquid Chromatography/Mass Spectrometry.

resultsTwenty four hours after WLI, 407 metabolites were detected in liver samples while 347 metabolites were detected in plasma. Plasma metabolites associated with 50 Gy WLI included several amino acids, purine and pyrimidine metabolites, microbial metabolites, and most prominently bradykinin and 3-indoxyl-sulfate. Liver metabolites associated with 50 Gy WLI included pentose phosphate, purine, and pyrimidine metabolites in liver. Plasma biomarkers in common between WLI and WBI were enriched in microbial metabolites such as 3 indoxyl sulfate, indole-3-lactic acid, phenyllactic acid, pipecolic acid, hippuric acid, and markers of DNA damage such as 2-deoxyuridine. Metabolites associated with tryptophan and indoles may reflect radiation-induced gut microbiome effects. Predominant liver biomarkers in common between WBI and WLI were amino acids, sugars, TCA metabolites (fumarate), fatty acids (lineolate, n-hexadecanoic acid) and DNA damage markers (uridine).

conclusionsWe identified a set of metabolomic markers that may prove useful as plasma biomarkers of RILD and WBI. Pathway analysis also suggested that the unique metabolic changes observed after liver irradiation was an integrative response of the intestine, liver and kidney.

Indexed as

Gas Chromatography-Mass SpectrometryRadiation InjuriesTandem Mass SpectrometryAmino AcidsAnimalsBiomarkersChromatography, High Pressure LiquidDiscriminant AnalysisLiverMaleMiceMice, Inbred C57BLPrincipal Component AnalysisWhole-Body IrradiationAmino AcidsBiomarkers

Identifiers

PMID26046990
PMCPMC4457483
OpenAlexW1536593162

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.