Evidence map›Paper›PMID 26046769›Full record

ArticlePLoS pathogens2015

Crystal Structure of USP7 Ubiquitin-like Domains with an ICP0 Peptide Reveals a Novel Mechanism Used by Viral and Cellular Proteins to Target USP7.

Roland Pfoh, Ira Kay Lacdao, Anna A Georges, Adam Capar, Hong Zheng, Lori Frappier, Vivian Saridakis

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 67 citations in OpenAlex.

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  15. Molecular Mechanisms of DUBs Regulation in Signaling and Disease.International journal of molecular sciences · 2021
    Review
  16. Role of Ubiquitin-Specific Peptidase 47 in Cancers and Other Diseases.Frontiers in cell and developmental biology · 2021
    Review
  17. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Roland PfohDepartment of Biology, York University, Toronto, Ontario, Canada.
Ira Kay LacdaoDepartment of Biology, York University, Toronto, Ontario, Canada.
Anna A GeorgesDepartment of Molecular Genetics, University of Toronto, Toronto, Ontario, Canada.
Adam CaparDepartment of Biology, York University, Toronto, Ontario, Canada.
Hong ZhengDepartment of Biology, York University, Toronto, Ontario, Canada.
Lori FrappierDepartment of Molecular Genetics, University of Toronto, Toronto, Ontario, Canada.
Vivian SaridakisDepartment of Biology, York University, Toronto, Ontario, Canada.
York University · CAUniversity of Toronto · CA

Funding

Canadian Institutes of Health Research 106583
6 · The paper itself

Abstract

Herpes simplex virus-1 immediate-early protein ICP0 activates viral genes during early stages of infection, affects cellular levels of multiple host proteins and is crucial for effective lytic infection. Being a RING-type E3 ligase prone to auto-ubiquitination, ICP0 relies on human deubiquitinating enzyme USP7 for protection against 26S proteasomal mediated degradation. USP7 is involved in apoptosis, epigenetics, cell proliferation and is targeted by several herpesviruses. Several USP7 partners, including ICP0, GMPS, and UHRF1, interact through its C-terminal domain (CTD), which contains five ubiquitin-like (Ubl) structures. Despite the fact that USP7 has emerged as a drug target for cancer therapy, structural details of USP7 regulation and the molecular mechanism of interaction at its CTD have remained elusive. Here, we mapped the binding site between an ICP0 peptide and USP7 and determined the crystal structure of the first three Ubl domains bound to the ICP0 peptide, which showed that ICP0 binds to a loop on Ubl2. Sequences similar to the USP7-binding site in ICP0 were identified in GMPS and UHRF1 and shown to bind USP7-CTD through Ubl2. In addition, co-immunoprecipitation assays in human cells comparing binding to USP7 with and without a Ubl2 mutation, confirmed the importance of the Ubl2 binding pocket for binding ICP0, GMPS and UHRF1. Therefore we have identified a novel mechanism of USP7 recognition that is used by both viral and cellular proteins. Our structural information was used to generate a model of near full-length USP7, showing the relative position of the ICP0/GMPS/UHRF1 binding pocket and the structural basis by which it could regulate enzymatic activity.

Indexed as

Binding SitesBlotting, WesternCrystallizationHEK293 CellsHerpesviridae InfectionsHumansImmediate-Early ProteinsImmunoprecipitationProtein BindingProtein ConformationTransfectionUbiquitin-Protein LigasesUbiquitin-Specific Peptidase 7Ubiquitin ThiolesteraseImmediate-Early ProteinsUbiquitin-Protein LigasesUbiquitin-Specific Peptidase 7Ubiquitin ThiolesteraseUSP7 protein, humanVmw110 protein, Human herpesvirus 1

Identifiers

PMID26046769
PMCPMC4457826
OpenAlexW620025267

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.