Evidence map›Paper›PMID 26046528›Full record

ArticlePLoS pathogens2015

An Ultrasensitive Mechanism Regulates Influenza Virus-Induced Inflammation.

Jason E Shoemaker, Satoshi Fukuyama, Amie J Eisfeld, Dongming Zhao, Eiryo Kawakami, Saori Sakabe, Tadashi Maemura, Takeo Gorai, Hiroaki Katsura, Yukiko Muramoto and 6 more

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 32 citations in OpenAlex.

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  4. Pleural macrophages translocate to the lung during infection to promote improved influenza outcomes.Proceedings of the National Academy of Sciences of the United States of America · 2023
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  11. In vivo imaging of the pathophysiological changes and neutrophil dynamics in influenza virus-infected mouse lungs.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
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  18. Article
  19. Lethal influenza infection: Is a macrophage to blame?Expert review of anti-infective therapy · 2015
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 5 institutions in 2 countries.

Jason E ShoemakerERATO Infection-induced Host Responses Project, Japan Science and Technology Agency, Saitama, Japan; Division of Virology, Department of Microbiology and Immunology, Institute of Medical Science, University of Tokyo, Tokyo, Japan.
Satoshi FukuyamaERATO Infection-induced Host Responses Project, Japan Science and Technology Agency, Saitama, Japan; Division of Virology, Department of Microbiology and Immunology, Institute of Medical Science, University of Tokyo, Tokyo, Japan.
Amie J EisfeldSchool of Veterinary Medicine, Department of Pathobiological Sciences, Influenza Research Institute, University of Wisconsin-Madison, Madison, Wisconsin, United States of America.
Dongming ZhaoERATO Infection-induced Host Responses Project, Japan Science and Technology Agency, Saitama, Japan; Division of Virology, Department of Microbiology and Immunology, Institute of Medical Science, University of Tokyo, Tokyo, Japan.
Eiryo KawakamiERATO Infection-induced Host Responses Project, Japan Science and Technology Agency, Saitama, Japan; Laboratory for Disease Systems Modeling, RIKEN Center for Integrative Medical Sciences, Kanagawa, Japan.
Saori SakabeERATO Infection-induced Host Responses Project, Japan Science and Technology Agency, Saitama, Japan; Department of Emerging Infectious Diseases, Institute of Tropical Medicine, Nagasaki University, Nagasaki, Japan.
Tadashi MaemuraDivision of Virology, Department of Microbiology and Immunology, Institute of Medical Science, University of Tokyo, Tokyo, Japan.
Takeo GoraiSchool of Veterinary Medicine, Department of Pathobiological Sciences, Influenza Research Institute, University of Wisconsin-Madison, Madison, Wisconsin, United States of America.
Hiroaki KatsuraDivision of Virology, Department of Microbiology and Immunology, Institute of Medical Science, University of Tokyo, Tokyo, Japan.
Yukiko MuramotoERATO Infection-induced Host Responses Project, Japan Science and Technology Agency, Saitama, Japan; Division of Virology, Department of Microbiology and Immunology, Institute of Medical Science, University of Tokyo, Tokyo, Japan.
Shinji WatanabeERATO Infection-induced Host Responses Project, Japan Science and Technology Agency, Saitama, Japan; Laboratory of Veterinary Microbiology, Department of Veterinary Sciences, University of Miyazaki, Miyazaki, Japan.
Tokiko WatanabeERATO Infection-induced Host Responses Project, Japan Science and Technology Agency, Saitama, Japan; Division of Virology, Department of Microbiology and Immunology, Institute of Medical Science, University of Tokyo, Tokyo, Japan.
Ken FujiERATO Infection-induced Host Responses Project, Japan Science and Technology Agency, Saitama, Japan; Tokyo Metropolitan Institute of Medical Science, Tokyo, Japan.
Yukiko MatsuokaERATO Infection-induced Host Responses Project, Japan Science and Technology Agency, Saitama, Japan; The Systems Biology Institute, Tokyo, Japan.
Hiroaki KitanoERATO Infection-induced Host Responses Project, Japan Science and Technology Agency, Saitama, Japan; Laboratory for Disease Systems Modeling, RIKEN Center for Integrative Medical Sciences, Kanagawa, Japan; The Systems Biology Institute, Tokyo, Japan; Okinawa Institute of Science and Technology, Okinawa, Japan.
Yoshihiro KawaokaERATO Infection-induced Host Responses Project, Japan Science and Technology Agency, Saitama, Japan; Division of Virology, Department of Microbiology and Immunology, Institute of Medical Science, University of Tokyo, Tokyo, Japan; School of Veterinary Medicine, Department of Pathobiological Sciences, Influenza Research Institute, University of Wisconsin-Madison, Madison, Wisconsin, United States of America; Department of Special Pathogens, International Research Center for Infectious Diseases, Institute of Medical Science, University of Tokyo, Tokyo, Japan.
Japan Science and Technology Agency · JPUniversity of Wisconsin–Madison · USNagasaki University · JPNational Institute of Infectious Diseases · JPOkinawa Institute of Science and Technology Graduate University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Influenza viruses present major challenges to public health, evident by the 2009 influenza pandemic. Highly pathogenic influenza virus infections generally coincide with early, high levels of inflammatory cytokines that some studies have suggested may be regulated in a strain-dependent manner. However, a comprehensive characterization of the complex dynamics of the inflammatory response induced by virulent influenza strains is lacking. Here, we applied gene co-expression and nonlinear regression analysis to time-course, microarray data developed from influenza-infected mouse lung to create mathematical models of the host inflammatory response. We found that the dynamics of inflammation-associated gene expression are regulated by an ultrasensitive-like mechanism in which low levels of virus induce minimal gene expression but expression is strongly induced once a threshold virus titer is exceeded. Cytokine assays confirmed that the production of several key inflammatory cytokines, such as interleukin 6 and monocyte chemotactic protein 1, exhibit ultrasensitive behavior. A systematic exploration of the pathways regulating the inflammatory-associated gene response suggests that the molecular origins of this ultrasensitive response mechanism lie within the branch of the Toll-like receptor pathway that regulates STAT1 phosphorylation. This study provides the first evidence of an ultrasensitive mechanism regulating influenza virus-induced inflammation in whole lungs and provides insight into how different virus strains can induce distinct temporal inflammation response profiles. The approach developed here should facilitate the construction of gene regulatory models of other infectious diseases.

Indexed as

Influenza A Virus, H1N1 SubtypeAnimalsBlotting, WesternFemaleFlow CytometryInflammationMiceMice, Inbred C57BLOligonucleotide Array Sequence AnalysisOrthomyxoviridae InfectionsTranscriptomeVirulence

Identifiers

PMID26046528
PMCPMC4457877
OpenAlexW630322457

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.