Evidence map›Paper›PMID 26044810›Full record

ArticleJournal of medical genetics2015

Breakpoint mapping by whole genome sequencing identifies PTH2R gene disruption in a patient with midline craniosynostosis and a de novo balanced chromosomal rearrangement.

Juwon Kim, Hong-Hee Won, Yoonjung Kim, Jong Rak Choi, Nae Yu, Kyung-A Lee

Open access · bronzeAbstract readCase Reports
In one paragraph

Article in Journal of medical genetics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.7field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 13 citations in OpenAlex.

  1. Review
  2. Review
  3. Convergent copy number increase of genes associated with freshwater colonization in fishes.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2022
    Article
  4. Article
  5. Genetic advances in craniosynostosis.American journal of medical genetics. Part A · 2017
    Review
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Juwon KimDepartment of Laboratory Medicine, Yonsei University Wonju College of Medicine, Wonju, Korea.
Hong-Hee WonCenter for Human Genetic Research, Massachusetts General Hospital, Boston, Massachusetts, USA Department of Medicine, Harvard Medical School, Boston, Massachusetts, USA Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USA.
Yoonjung KimDepartment of Laboratory Medicine, Yonsei University Wonju College of Medicine, Wonju, Korea.
Jong Rak ChoiDepartment of Laboratory Medicine, Yonsei University College of Medicine, Seoul, Korea.
Nae YuDepartment of Laboratory Medicine, Yonsei University College of Medicine, Seoul, Korea.
Kyung-A LeeDepartment of Laboratory Medicine, Yonsei University College of Medicine, Seoul, Korea.
Yonsei University · KRHarvard University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundCraniosynostosis (CRS) is a premature closure of calvarial sutures caused by gene mutation or environmental factors or interaction between the two. Only a small proportion of non-syndromic CRS (NSC) patients have a known genetic cause, and thus, it would be meaningful to search for a causative gene disruption for the development NSC. We applied a whole genome sequencing approach on a 15-month-old boy with sagittal and metopic synostosis to identify a gene responsible for the development of the disease. METHODS AND

resultsConventional chromosome study revealed a complex paracentric inversion involving 2q14.3 and 2q34. Array comparative genomic hybridisation did not show any copy number variation. Multicolour banding analysis was carried out and the breakpoints were refined to 2q14 and 2q34. An intronic break of the PTH2R gene was detected by whole genome sequencing and fluorescence in situ hybridisation analysis confirmed disruption of PTH2R.

conclusionsWe report PTH2R as a gene that is disrupted in NSC. The disruption of the PTH2R gene may cause uncontrolled proliferation and differentiation of chondrocytes, which in turn results in premature closure of sutures. This addition of PTH2R to the list of genes associated with NSC expands our understanding of the development of NSC.

Indexed as

Chromosome InversionComparative Genomic HybridizationCraniosynostosesHumansInfantIn Situ Hybridization, FluorescenceMaleReceptor, Parathyroid Hormone, Type 2Sequence Analysis, DNATranslocation, GeneticReceptor, Parathyroid Hormone, Type 2ChromosomalClinical geneticsDevelopmental

Identifiers

PMID26044810
PMCPMC4621369
OpenAlexW2207377644

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.