Evidence map›Paper›PMID 26042838›Full record

ArticleMolecular oral microbiology2015

Transcriptional profile of glucose-shocked and acid-adapted strains of Streptococcus mutans.

J L Baker, J Abranches, R C Faustoferri, C J Hubbard, J A Lemos, M A Courtney, R Quivey

Open access · greenAbstract read
In one paragraph

Article in Molecular oral microbiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
3.9field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
  2. Article
  3. SppR inFrontiers in cellular and infection microbiology · 2026
    Article
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  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. [Transcriptomic Analysis ofSichuan da xue xue bao. Yi xue ban = Journal of Sichuan University. Medical science edition · 2021
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Acid Stress Response Mechanisms of Group B Streptococci.Frontiers in cellular and infection microbiology · 2017
    Review
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

J L BakerDepartment of Microbiology and Immunology, University of Rochester School of Medicine and Dentistry, Rochester, NY, USA.
J AbranchesDepartment of Microbiology and Immunology, University of Rochester School of Medicine and Dentistry, Rochester, NY, USA.
R C FaustoferriCenter for Oral Biology, University of Rochester School of Medicine and Dentistry, Rochester, NY, USA.
C J HubbardCenter for Oral Biology, University of Rochester School of Medicine and Dentistry, Rochester, NY, USA.
J A LemosDepartment of Microbiology and Immunology, University of Rochester School of Medicine and Dentistry, Rochester, NY, USA.
M A CourtneyDepartment of Microbiology and Immunology, University of Rochester School of Medicine and Dentistry, Rochester, NY, USA.
R QuiveyDepartment of Microbiology and Immunology, University of Rochester School of Medicine and Dentistry, Rochester, NY, USA.
University of Rochester · US

Funding

Oxidative Stress Responses in Oral StreptococciR01DE013683 · NIDCR · UNIVERSITY OF ROCHESTER · PI QUIVEY, ROBERT G · 2000 to 2019
$6.2M
Training Program in Oral ScienceT90DE021985 · NIDCR · UNIVERSITY OF ROCHESTER · PI OVITT, CATHERINE, YULE, DAVID I · 2011 to 2021
$5.6M
Role of the Spx Regulator in Streptococcus mutansR01DE019783 · NIDCR · UNIVERSITY OF ROCHESTER · PI LEMOS, JOSE A · 2010 to 2020
$3.7M
Low pH-mediated membrane biosynthesis in S. mutans.R01DE017157 · NIDCR · UNIVERSITY OF ROCHESTER · PI QUIVEY, ROBERT G · 2006 to 2010
$1.8M
NIDCR NIH HHS DE013683NIDCR NIH HHS DE017157NIDCR NIH HHS DE019783NIDCR NIH HHS R01 DE013683NIDCR NIH HHS R01 DE017157NIDCR NIH HHS R01 DE019783NIDCR NIH HHS T90 DE-021985NIDCR NIH HHS T90 DE021985
6 · The paper itself

Abstract

The aciduricity of Streptococcus mutans is an important virulence factor of the organism, required to both out-compete commensal oral microorganisms and cause dental caries. In this study, we monitored transcriptional changes that occurred as a continuous culture of either an acid-tolerant strain (UA159) or an acid-sensitive strain (fabM::Erm) moved from steady-state growth at neutral pH, experienced glucose-shock and acidification of the culture, and transitioned to steady-state growth at low pH. Hence, the timing of elements of the acid tolerance response (ATR) could be observed and categorized as acute vs. adaptive ATR mechanisms. Modulation of branched chain amino acid biosynthesis, DNA/protein repair mechanisms, reactive oxygen species metabolizers and phosphoenolpyruvate:phosphotransferase systems occurred in the initial acute phase, immediately following glucose-shock, while upregulation of F1 F0 -ATPase did not occur until the adaptive phase, after steady-state growth had been re-established. In addition to the archetypal ATR pathways mentioned above, glucose-shock led to differential expression of genes suggesting a re-routing of resources away from the synthesis of fatty acids and proteins, and towards synthesis of purines, pyrimidines and amino acids. These adjustments were largely transient, as upon establishment of steady-state growth at acidic pH, transcripts returned to basal expression levels. During growth at steady-state pH 7, fabM::Erm had a transcriptional profile analogous to that of UA159 during glucose-shock, indicating that even during growth in rich media at neutral pH, the cells were stressed. These results, coupled with a recently established collection of deletion strains, provide a starting point for elucidation of the acid tolerance response in S. mutans.

Indexed as

Adaptation, PhysiologicalBacterial ProteinsFatty AcidsGene Expression ProfilingGlucoseHydrogen-Ion ConcentrationStreptococcus mutansStress, PhysiologicalBacterial ProteinsFatty AcidsGlucoseacid adaptationgenomic characterizationoral streptococcistress responsetranscriptome

Identifiers

PMID26042838
PMCPMC4659386
OpenAlexW1563543998

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.