Evidence map›Paper›PMID 26042670›Full record

ArticleScientific reports2015

SUMOylation of xeroderma pigmentosum group C protein regulates DNA damage recognition during nucleotide excision repair.

Masaki Akita, Yon-Soo Tak, Tsutomu Shimura, Syota Matsumoto, Yuki Okuda-Shimizu, Yuichiro Shimizu, Ryotaro Nishi, Hisato Saitoh, Shigenori Iwai, Toshio Mori and 4 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.8field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 35 citations in OpenAlex.

  1. Article
  2. SUMO and the DNA damage response.Biochemical Society transactions · 2024
    Review
  3. Article
  4. Review
  5. DNA Repair in Haploid Context.International journal of molecular sciences · 2021
    Review
  6. Review
  7. Article
  8. Review
  9. Article
  10. Review
  11. Formation and Recognition of UV-Induced DNA Damage within Genome Complexity.International journal of molecular sciences · 2020
    Review
  12. Article
  13. Article
  14. Review
  15. Review
  16. Review
  17. Review
  18. Review
  19. Article
  20. Lack of Associations betweenBioMed research international · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 1 country.

Masaki AkitaBiosignal Research Center, Organization of Advanced Science and Technology, Kobe University, Kobe 657-8501, Japan.
Yon-Soo TakBiosignal Research Center, Organization of Advanced Science and Technology, Kobe University, Kobe 657-8501, Japan.
Tsutomu ShimuraBiosignal Research Center, Organization of Advanced Science and Technology, Kobe University, Kobe 657-8501, Japan.
Syota Matsumoto1] Biosignal Research Center, Organization of Advanced Science and Technology, Kobe University, Kobe 657-8501, Japan [2] Graduate School of Science, Kobe University, Kobe 657-8501, Japan.
Yuki Okuda-ShimizuCellular Physiology Laboratory, RIKEN, Wako 351-0198, Japan.
Yuichiro ShimizuCellular Physiology Laboratory, RIKEN, Wako 351-0198, Japan.
Ryotaro Nishi1] Biosignal Research Center, Organization of Advanced Science and Technology, Kobe University, Kobe 657-8501, Japan [2] Cellular Physiology Laboratory, RIKEN, Wako 351-0198, Japan.
Hisato SaitohGraduate School of Science and Technology, Kumamoto University, Kumamoto 860-8555, Japan.
Shigenori IwaiGraduate School of Engineering Science, Osaka University, Toyonaka 560-8531, Japan.
Toshio MoriRadioisotope Research Center, Nara Medical University, Kashihara 634-8521, Japan.
Tsuyoshi IkuraRadiation Biology Center, Kyoto University, Kyoto 606-8501, Japan.
Wataru Sakai1] Biosignal Research Center, Organization of Advanced Science and Technology, Kobe University, Kobe 657-8501, Japan [2] Graduate School of Science, Kobe University, Kobe 657-8501, Japan.
Fumio Hanaoka1] Cellular Physiology Laboratory, RIKEN, Wako 351-0198, Japan [2] Faculty of Science, Gakushuin University, Tokyo 171-8588, Japan.
Kaoru Sugasawa1] Biosignal Research Center, Organization of Advanced Science and Technology, Kobe University, Kobe 657-8501, Japan [2] Graduate School of Science, Kobe University, Kobe 657-8501, Japan [3] Cellular Physiology Laboratory, RIKEN, Wako 351-0198, Japan.
Kobe University · JPRIKEN Advanced Science Institute · JPKumamoto University · JPKyoto University · JPNara Medical University · JPOsaka University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The xeroderma pigmentosum group C (XPC) protein complex is a key factor that detects DNA damage and initiates nucleotide excision repair (NER) in mammalian cells. Although biochemical and structural studies have elucidated the interaction of XPC with damaged DNA, the mechanism of its regulation in vivo remains to be understood in more details. Here, we show that the XPC protein undergoes modification by small ubiquitin-related modifier (SUMO) proteins and the lack of this modification compromises the repair of UV-induced DNA photolesions. In the absence of SUMOylation, XPC is normally recruited to the sites with photolesions, but then immobilized profoundly by the UV-damaged DNA-binding protein (UV-DDB) complex. Since the absence of UV-DDB alleviates the NER defect caused by impaired SUMOylation of XPC, we propose that this modification is critical for functional interactions of XPC with UV-DDB, which facilitate the efficient damage handover between the two damage recognition factors and subsequent initiation of NER.

Indexed as

DNA DamageDNA RepairCell LineDNA-Binding ProteinsHumansMutationProtein BindingSUMO-1 ProteinSumoylationUbiquitinationUbiquitin-Conjugating EnzymesUltraviolet RaysDDB2 protein, humanDNA-Binding ProteinsSUMO-1 ProteinUbiquitin-Conjugating EnzymesXPC protein, human

Identifiers

PMID26042670
PMCPMC4455304
OpenAlexW809077599

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.