ReviewFrontiers in plant science2015
System approaches to study root hairs as a single cell plant model: current status and future perspectives.
Review in Frontiers in plant science, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.
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Who cites it
12 citing papers in PubMed.
- Modulating root system architecture: cross-talk between auxin and phytohormones.Frontiers in plant science · 2024Review
- Strigolactones act downstream of gibberellins to regulate fiber cell elongation and cell wall thickness in cotton (Gossypium hirsutum).The Plant cell · 2022Article
- High-Resolution Translatome Analysis Reveals Cortical Cell Programs During Early Soybean Nodulation.Frontiers in plant science · 2022Article
- A Sight on Single-Cell Transcriptomics in Plants Through the Prism of Cell-Based Computational Modeling Approaches: Benefits and Challenges for Data Analysis.Frontiers in genetics · 2021Review
- Expression Partitioning of Duplicate Genes at Single Cell Resolution inFrontiers in genetics · 2020Article
- Single-Cell Genomic Analysis in Plants.Genes · 2018Review
- A comparative genomic and transcriptomic analysis at the level of isolated root hair cells reveals new conserved root hair regulatory elements.Plant molecular biology · 2017Article
- Complexity and specificity of the maize (Zea mays L.) root hair transcriptome.Journal of experimental botany · 2017Article
- Membrane glycerolipidome of soybean root hairs and its response to nitrogen and phosphate availability.Scientific reports · 2016Article
- Decipher the Molecular Response of Plant Single Cell Types to Environmental Stresses.BioMed research international · 2016Review
- Nod Factor Effects on Root Hair-Specific Transcriptome of Medicago truncatula: Focus on Plasma Membrane Transport Systems and Reactive Oxygen Species Networks.Frontiers in plant science · 2016Article
- Soybean Roots Grown under Heat Stress Show Global Changes in Their Transcriptional and Proteomic Profiles.Frontiers in plant science · 2016Article
Corrections and comments
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Authors and funding
3 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Our current understanding of plant functional genomics derives primarily from measurements of gene, protein and/or metabolite levels averaged over the whole plant or multicellular tissues. These approaches risk diluting the response of specific cells that might respond strongly to the treatment but whose signal is diluted by the larger proportion of non-responding cells. For example, if a gene is expressed at a low level, does this mean that it is indeed lowly expressed or is it highly expressed, but only in a few cells? In order to avoid these issues, we adopted the soybean root hair cell, derived from a single, differentiated root epidermal cell, as a single-cell model for functional genomics. Root hair cells are intrinsically interesting since they are major conduits for root water and nutrient uptake and are also the preferred site of infection by nitrogen-fixing rhizobium bacteria. Although a variety of other approaches have been used to study single plant cells or single cell types, the root hair system is perhaps unique in allowing application of the full repertoire of functional genomic and biochemical approaches. In this mini review, we summarize our published work and place this within the broader context of root biology, with a significant focus on understanding the initial events in the soybean-rhizobium interaction.
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