Evidence map›Paper›PMID 26041938›Full record

ArticleMolecular cancer research : MCR2015

VEGFR-1 Pseudogene Expression and Regulatory Function in Human Colorectal Cancer Cells.

Xiangcang Ye, Fan Fan, Rajat Bhattacharya, Seth Bellister, Delphine R Boulbes, Rui Wang, Ling Xia, Cristina Ivan, Xiaofeng Zheng, George A Calin and 3 more

Open access · greenAbstract read
In one paragraph

Article in Molecular cancer research : MCR, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 29 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Pseudogene CSPG4P12 inhibits colorectal cancer progression by attenuating epithelial-mesenchymal transition.Brazilian journal of medical and biological research = Revista brasileira de pesquisas medicas e biologica · 2024
    Article
  6. Review
  7. Article
  8. Review
  9. Article
  10. Review
  11. DysregulatedReports of biochemistry & molecular biology · 2019
    Article
  12. Complexities of post-transcriptional regulation and the modeling of ceRNA crosstalk.Critical reviews in biochemistry and molecular biology · 2018
    Review
  13. Article
  14. Review
  15. Pseudogenes regulate parental gene expression via ceRNA network.Journal of cellular and molecular medicine · 2017
    Review
  16. Article
  17. Article
  18. Pseudogene-expressed RNAs: a new frontier in cancers.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2016
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 1 institution in 1 country.

Xiangcang YeDepartment of Surgical Oncology, The University of Texas MD Anderson Cancer Center, Houston, Texas. lellis@mdanderson.org xcye@mdanderson.org.
Fan FanDepartment of Surgical Oncology, The University of Texas MD Anderson Cancer Center, Houston, Texas.
Rajat BhattacharyaDepartment of Surgical Oncology, The University of Texas MD Anderson Cancer Center, Houston, Texas.
Seth BellisterDepartment of Surgical Oncology, The University of Texas MD Anderson Cancer Center, Houston, Texas.
Delphine R BoulbesDepartment of Surgical Oncology, The University of Texas MD Anderson Cancer Center, Houston, Texas.
Rui WangDepartment of Surgical Oncology, The University of Texas MD Anderson Cancer Center, Houston, Texas.
Ling XiaDepartment of Surgical Oncology, The University of Texas MD Anderson Cancer Center, Houston, Texas.
Cristina IvanDepartment of Gynecologic Oncology, The University of Texas MD Anderson Cancer Center, Houston, Texas.
Xiaofeng ZhengDepartment of Bioinformatics and Computational Biology, The University of Texas MD Anderson Cancer Center, Houston, Texas.
George A CalinDepartment of Experimental Therapeutics, The University of Texas MD Anderson Cancer Center, Houston, Texas.
Jing WangDepartment of Bioinformatics and Computational Biology, The University of Texas MD Anderson Cancer Center, Houston, Texas.
Xiongbin LuDepartment of Cancer Biology, The University of Texas MD Anderson Cancer Center, Houston, Texas.
Lee M EllisDepartment of Surgical Oncology, The University of Texas MD Anderson Cancer Center, Houston, Texas. Department of Molecular and Cellular Oncology, The University of Texas MD Anderson Cancer Center, Houston, Texas. lellis@mdanderson.org xcye@mdanderson.org.
The University of Texas MD Anderson Cancer Center · US

Funding

Tumor Evolution and Metastasis ProgramP30CA016672 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI Kathrin Milbury · 1985 to 2026
$290.8M
TRAINING OF ACADEMIC SURGICAL ONCOLOGISTST32CA009599 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI Ashley M Holder, Jennifer A. Wargo · 1988 to 2026
$13.2M
Paracrine Role of Endothelial Cells on the Colorectal Cancer Stem Cell PhenotypeR01CA157880 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI ELLIS, LEE M. · 2012 to 2016
$1.5M
Function of VEGF Receptor-1 on Colorectal Cancer CellsR01CA112390 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI ELLIS, LEE M. · 2005 to 2009
$1.1M
NCI NIH HHS CA016672NCI NIH HHS CA100879NCI NIH HHS P30 CA016672NCI NIH HHS R01 CA112390NCI NIH HHS R01 CA157880NCI NIH HHS R01CA157880NCI NIH HHS T32 CA009599NCI NIH HHS T32CA009599
6 · The paper itself

Abstract

unlabelledA large number of pseudogenes have been found to be transcribed in human cancers. However, only a few pseudogenes are functionally characterized. Here, we identified a transcribed pseudogene of VEGFR1, or fms-related tyrosine kinase 1 (FLT1), in human colorectal cancer cells. Interestingly, this pseudogene (designated as FLT1P1) was found to be transcribed bidirectionally and functionally modulated cognate VEGFR1 protein expression in the cells. Mechanistically, expression of FLT1P1 antisense transcript not only inhibited the VEGFR1 expression, but also inhibited non-cognate VEGF-A expression through interaction with miR-520a. Perturbation of FLT1P1 expression by RNA interference (RNAi) markedly inhibited tumor cell proliferation and xenograft tumor growth. This study identifies FLT1P1 antisense as a critical regulator of VEGFR1 and VEGF-A expression in colorectal cancer cells, and highlights its role in regulation of the pathogenesis of colorectal cancer. IMPLICATIONS: The VEGFR1 pseudogene, FLT1P1, is a novel and functional regulator of VEGF signaling and its targeting could be an alternative strategy to modulate its cognate/target gene expression and downstream activity in cancer.

Indexed as

PseudogenesAnimalsCell Line, TumorCell ProliferationColorectal NeoplasmsFemaleHeterograftsHumansMice, NudeMicroRNAsRNA, AntisenseRNA, MessengerVascular Endothelial Growth Factor AVascular Endothelial Growth Factor Receptor-1FLT1 protein, humanMicroRNAsMIRN520 microRNA, humanRNA, AntisenseRNA, MessengerVascular Endothelial Growth Factor AVascular Endothelial Growth Factor Receptor-1

Identifiers

PMID26041938
PMCPMC4573265
OpenAlexW1929553416

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.