Evidence map›Paper›PMID 26041935›Full record

ArticleMolecular biology of the cell2015

Nuclear pore complex integrity requires Lnp1, a regulator of cortical endoplasmic reticulum.

Amanda K Casey, Shuliang Chen, Peter Novick, Susan Ferro-Novick, Susan R Wente

Abstract read
In one paragraph

Article in Molecular biology of the cell, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 38 citations in OpenAlex.

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  14. The Structure of the Nuclear Pore Complex (An Update).Annual review of biochemistry · 2019
    Review
  15. Article
  16. Article
  17. Article
  18. ER-phagy requires Lnp1, a protein that stabilizes rearrangements of the ER network.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Amanda K CaseyDepartment of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, TN 37232.
Shuliang ChenDepartment of Cellular and Molecular Medicine, University of California at San Diego, La Jolla, CA 92093.
Peter NovickDepartment of Cellular and Molecular Medicine, University of California at San Diego, La Jolla, CA 92093 Howard Hughes Medical Institute, University of California at San Diego, La Jolla, CA 92093.
Susan Ferro-NovickDepartment of Cellular and Molecular Medicine, University of California at San Diego, La Jolla, CA 92093.
Susan R WenteDepartment of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, TN 37232 susan.wente@vanderbilt.edu).
University of California San Diego · USVanderbilt University · USHoward Hughes Medical Institute · US

Funding

Tumor Immunology and Microenvironment Research ProgramP30CA068485 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI MATTHEW J TYSKA · 1995 to 2026
$172.8M
Translational Analysis CoreP30DK058404 · NIDDK · VANDERBILT UNIVERSITY MEDICAL CENTER · PI RICHARD M. PEEK · 2002 to 2026
$29.9M
Vanderbilt Diabetes Research CenterP30DK020593 · NIDDK · VANDERBILT UNIVERSITY MEDICAL CENTER · PI OWEN P MCGUINNESS · 2012 to 2026
$29.3M
TRANSGENIC MOUSE/ ES CELL SHARES RESOURCESP60DK020593 · NIDDK · VANDERBILT UNIVERSITY · PI MCGUINNESS, OWEN P · 1986 to 2011
$28.1M
Shop Module CoreP30EY008126 · NEI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI Kevin L Schey · 1989 to 2026
$19.6M
Vanderbilt Mouse Metabolic Physiology CenterU24DK059637 · NIDDK · VANDERBILT UNIVERSITY · PI WASSERMAN, DAVID H · 2001 to 2015
$14.9M
GENETICS OF SECRETION IN YEASTR01GM035370 · NIGMS · YALE UNIVERSITY · PI PETER Jay NOVICK · 1985 to 2026
$7.0M
Vanderbilt Mouse Metabolic Phenotyping CenterU2CDK059637 · NIDDK · VANDERBILT UNIVERSITY · PI WASSERMAN, DAVID H · 2016 to 2021
$6.3M
REGULATION OF NUCLEAR PORE COMPLEX ASSEMBLYR01GM057438 · NIGMS · WASHINGTON UNIVERSITY · PI HETZER, MARTIN W, WENTE, SUSAN R. · 1998 to 2011
$3.5M
Acquisition of a super-resolution optical microscopeS10OD012324 · OD · VANDERBILT UNIVERSITY · PI TYSKA, MATTHEW J · 2012 to 2012
$1.1M
Howard Hughes Medical InstituteNCI NIH HHS CA68485NCI NIH HHS P30 CA068485NCI NIH HHS P30 CA68485NEI NIH HHS EY08126NEI NIH HHS P30 EY008126NIDDK NIH HHS DK20593NIDDK NIH HHS DK58404NIDDK NIH HHS DK59637NIDDK NIH HHS P30 DK020593NIDDK NIH HHS P30 DK058404NIDDK NIH HHS P60 DK020593NIDDK NIH HHS U24 DK059637NIGMS NIH HHS 5R01 GM057438NIGMS NIH HHS R01 GM057438NIH HHS 1S10OD012324NIH HHS S10 OD012324
6 · The paper itself

Abstract

The nuclear envelope (NE) and endoplasmic reticulum (ER) are components of the same contiguous membrane system and yet have distinct cellular functions. Mounting evidence suggests roles for some ER proteins in the NE for proper nuclear pore complex (NPC) structure and function. In this study, we identify a NE role in Saccharomyces cerevisiae for Lnp1 and Sey1, proteins required for proper cortical ER formation. Both lnp1Δ and sey1Δ mutants exhibit synthetic genetic interactions with mutants in genes encoding key NPC structural components. Both Lnp1 and Sey1 physically associate with other ER components that have established NPC roles, including Rtn1, Yop1, Pom33, and Per33. Of interest, lnp1Δ rtn1Δ mutants but not rtn1Δ sey1Δ mutants exhibit defects in NPC distribution. Furthermore, the essential NPC assembly factor Ndc1 has altered interactions in the absence of Sey1. Lnp1 dimerizes in vitro via its C-terminal zinc finger motif, a property that is required for proper ER structure but not NPC integrity. These findings suggest that Lnp1's role in NPC integrity is separable from functions in the ER and is linked to Ndc1 and Rtn1 interactions.

Indexed as

AnimalsEndoplasmic ReticulumMembrane ProteinsNuclear EnvelopeNuclear PoreNuclear Pore Complex ProteinsSaccharomyces cerevisiae ProteinsVesicular Transport ProteinsLnp1 protein, S cerevisiaeMembrane ProteinsNuclear Pore Complex ProteinsSaccharomyces cerevisiae ProteinsSEY1 protein, S cerevisiaeVesicular Transport Proteins

Identifiers

PMID26041935
PMCPMC4571342
OpenAlexW2268407548

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.