Evidence map›Paper›PMID 26040894›Full record

ArticleScientific reports2015

Bicarbonate transporters in corals point towards a key step in the evolution of cnidarian calcification.

Didier Zoccola, Philippe Ganot, Anthony Bertucci, Natacha Caminiti-Segonds, Nathalie Techer, Christian R Voolstra, Manuel Aranda, Eric Tambutté, Denis Allemand, Joseph R Casey and 1 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 70 papers.

0numbers the graph read from it
0cells of the map it votes in
70citing papers in PubMed
16.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

70 citing papers in PubMed, 174 citations in OpenAlex.

  1. Article
  2. Building like a Coral-Parallelized, Multiscale Biofabrication.Advanced materials (Deerfield Beach, Fla.) · 2026
    Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Proteomic characterization of a foraminiferal test's organic matrix.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  9. Article
  10. The role of NaPflugers Archiv : European journal of physiology · 2024
    Review
  11. Article
  12. Article
  13. Role of the bicarbonate transporter SLC4γ in stony-coral skeleton formation and evolution.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  14. Article
  15. Article
  16. Environmental memory gained from exposure to extreme pCOProceedings. Biological sciences · 2022
    Article
  17. Article
  18. Article
  19. Review
  20. Review

10 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 4 countries.

Didier ZoccolaCentre Scientifique de Monaco, 8 quai Antoine Ier, Monaco, 98000, Monaco.
Philippe GanotCentre Scientifique de Monaco, 8 quai Antoine Ier, Monaco, 98000, Monaco.
Anthony BertucciARC Centre of Excellence for Coral Reef Studies, James Cook University, Townsville, QLD 4811, Australia.
Natacha Caminiti-SegondsCentre Scientifique de Monaco, 8 quai Antoine Ier, Monaco, 98000, Monaco.
Nathalie TecherCentre Scientifique de Monaco, 8 quai Antoine Ier, Monaco, 98000, Monaco.
Christian R VoolstraRed Sea Research Center, King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia.
Manuel ArandaRed Sea Research Center, King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia.
Eric TambuttéCentre Scientifique de Monaco, 8 quai Antoine Ier, Monaco, 98000, Monaco.
Denis AllemandCentre Scientifique de Monaco, 8 quai Antoine Ier, Monaco, 98000, Monaco.
Joseph R CaseyDepartment of Biochemistry, University of Alberta Edmonton, Alberta T6G 2H7, Canada.
Sylvie TambuttéCentre Scientifique de Monaco, 8 quai Antoine Ier, Monaco, 98000, Monaco.
Scientific Centre of Monaco · MCKing Abdullah University of Science and Technology · SAJames Cook University · AUUniversity of Alberta · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The bicarbonate ion (HCO3(-)) is involved in two major physiological processes in corals, biomineralization and photosynthesis, yet no molecular data on bicarbonate transporters are available. Here, we characterized plasma membrane-type HCO3(-) transporters in the scleractinian coral Stylophora pistillata. Eight solute carrier (SLC) genes were found in the genome: five homologs of mammalian-type SLC4 family members, and three of mammalian-type SLC26 family members. Using relative expression analysis and immunostaining, we analyzed the cellular distribution of these transporters and conducted phylogenetic analyses to determine the extent of conservation among cnidarian model organisms. Our data suggest that the SLC4γ isoform is specific to scleractinian corals and responsible for supplying HCO3(-) to the site of calcification. Taken together, SLC4γ appears to be one of the key genes for skeleton building in corals, which bears profound implications for our understanding of coral biomineralization and the evolution of scleractinian corals within cnidarians.

Indexed as

Biological EvolutionCalcification, PhysiologicAnimalsAnion Transport ProteinsAnthozoaBicarbonatesGene OrderModels, BiologicalProtein IsoformsSequence Analysis, DNAAnion Transport ProteinsBicarbonatesProtein Isoforms

Identifiers

PMID26040894
PMCPMC4650655
OpenAlexW2266887702

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.