Evidence map›Paper›PMID 26040556›Full record

ArticleCurrent genetics2016

Identifying and assessing the impact of wine acid-related genes in yeast.

Boredi S Chidi, Debra Rossouw, Florian F Bauer

Abstract read
PubMed Publisher
In one paragraph

Article in Current genetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
2.7field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 13 citations in OpenAlex.

  1. Review
  2. Mec1Current genetics · 2018
    Article
  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Boredi S ChidiDepartment of Oenology and Viticulture, Private Bag X1, Institute for Wine Biotechnology, Stellenbosch University, Stellenbosch, 7600, South Africa. chidi@sun.ac.za.
Debra RossouwDepartment of Oenology and Viticulture, Private Bag X1, Institute for Wine Biotechnology, Stellenbosch University, Stellenbosch, 7600, South Africa. debra@sun.ac.za.
Florian F BauerDepartment of Oenology and Viticulture, Private Bag X1, Institute for Wine Biotechnology, Stellenbosch University, Stellenbosch, 7600, South Africa. fb2@sun.ac.za.
Stellenbosch University · ZA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Saccharomyces cerevisiae strains used for winemaking show a wide range of fermentation phenotypes, and the genetic background of individual strains contributes significantly to the organoleptic properties of wine. This strain-dependent impact extends to the organic acid composition of the wine, an important quality parameter. However, little is known about the genes which may impact on organic acids during grape must fermentation. To generate novel insights into the genetic regulation of this metabolic network, a subset of genes was identified based on a comparative analysis of the transcriptomes and organic acid profiles of different yeast strains showing different production levels of organic acids. These genes showed significant inter-strain differences in their transcription levels at one or more stages of fermentation and were also considered likely to influence organic acid metabolism based on existing functional annotations. Genes selected in this manner were ADH3, AAD6, SER33, ICL1, GLY1, SFC1, SER1, KGD1, AGX1, OSM1 and GPD2. Yeast strains carrying deletions for these genes were used to conduct fermentations and determine organic acid levels at various stages of alcoholic fermentation in synthetic grape must. The impact of these deletions on organic acid profiles was quantified, leading to novel insights and hypothesis generation regarding the role/s of these genes in wine yeast acid metabolism under fermentative conditions. Overall, the data contribute to our understanding of the roles of selected genes in yeast metabolism in general and of organic acid metabolism in particular.

Indexed as

Genes, FungalWineAcidsChromatography, High Pressure LiquidFermentationGene Expression ProfilingGene Expression Regulation, FungalHydrogen-Ion ConcentrationKineticsPrincipal Component AnalysisSaccharomyces cerevisiaeSequence DeletionTranscriptomeYeastsAcidsOrganic acidsTranscriptomicsWineYeast

Identifiers

PMID26040556
OpenAlexW636513797

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.